G923320 (LOC106602173)


Basic Information

Item Value
gene id G923320
gene name LOC106602173
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72867586 ~ 72868626 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1050130
CTGACCTGATGGTTTATCTGTCACGGCAAAACCCCAAGGGTTGGCCTGGATAAACTGACCCTTGATTACGGCCAAGGAGGCTTAAACCTCCCCAATTTCAGAATGTACAATTGGACTGCAGTCTAGATGTCTAGCTCAGAGATTTGACAATGGTCCCTCTCCCTCATGGTTGAACAGTttgGAGGCGTATTCCATGAAAGCGATTGTGGACGGACCCCTCTGAAAACTTTGTTCTCTCCGCTCGAAATCTGGTGATCTGAAGTTCCATCAATTTCATTTTCCTCCGGAGAAATTCGTTCTCCTTGTGGCTTTGGGACATTTTCAGGTGCACAACAGCATAGCCATCGTCAACAACTTTGCAGATTTCGGCTACAGCCGCGTTGGCTAGCACCTCCATGATTGAGGCTATCTGCGCCTGGAACTCGACCACGGAACCCGACATTGTCCCCCGACTCTTTTTGCCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1050130 True 465 lncRNA 0.49 2 72867586 72868626

Neighbor

gene id symbol gene type direction distance location
LOC110534748 LOC106602173 coding downstream 14902 72808536 ~ 72852684 (-)
LOC110534782 LOC106610388 coding downstream 59315 72804653 ~ 72808271 (-)
LOC110534744 LOC106602172 coding downstream 64264 72792610 ~ 72803322 (-)
LOC110534749 LOC106602187 coding downstream 76518 72781731 ~ 72791068 (-)
LOC110534754 LOC106610391 coding downstream 87682 72770573 ~ 72779904 (-)
LOC110534756 LOC106610383 coding upstream 34686 72903312 ~ 72906796 (-)
LOC110497284 LOC106602177 coding upstream 40943 72909569 ~ 72917849 (-)
LOC110497281 LOC106610383 coding upstream 51832 72920458 ~ 72924307 (-)
LOC110497279 LOC106602180 coding upstream 56681 72925307 ~ 72931467 (-)
LOC110534758 LOC106602178 coding upstream 66147 72934773 ~ 72938701 (-)
G923297 NA non-coding downstream 106325 72760482 ~ 72761261 (-)
G923272 NA non-coding downstream 149144 72717609 ~ 72718442 (-)
G923262 NA non-coding downstream 163874 72701759 ~ 72703712 (-)
G923261 NA non-coding downstream 169390 72697018 ~ 72698196 (-)
G923228 NA non-coding downstream 243471 72623644 ~ 72624115 (-)
G923326 NA non-coding upstream 15995 72884621 ~ 72885147 (-)
G923185 LOC106610383 non-coding upstream 46973 72915599 ~ 72922200 (-)
G923192 LOC106610383 non-coding upstream 56834 72905577 ~ 72928468 (-)
G923334 NA non-coding upstream 63681 72932307 ~ 72932730 (-)
LOC110514144 LOC106602209 other downstream 1103666 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1119702 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1204452 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1270441 71595152 ~ 71597145 (-)
LOC110533203 LOC106610354 other downstream 1786074 71064699 ~ 71121753 (-)
G924041 NA other upstream 761516 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 2048551 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 2069279 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2184490 75053116 ~ 75056174 (-)

Expression


Co-expression Network