G923339



Basic Information


Item Value
gene id G923339
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72950446 ~ 72951057 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1050153
aagaaataaaacaacagtaaaaagacaggctatatacagtagcgaggctataaaagtagagaggctacatacagacaccggttagtcaggctgattgaggtagtatgtacatgtagatatggttaaagtgactatgcatatatgatgaacagagagtagcagtagcgtaaaagaggggttggtgggtgggacacaattcAGATTCAGCCCAGTTAGCCAAACCGCTGACTCTTTGTTTTTGATACTCCATACAGGATTCAACTGAAAATAACGATTGGATTACCATTCATATAATAAACATACTTTTGTGAGGAATCACCCATAAATACCATCTGGAGTTTGACATGTAGCCTACCTAGTGACTTTCCTGGCCTCTTTTATATACAACTCCACTGCTTTAGGCACCGAATGTTCAACAACA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1050153 True 421 lncRNA 0.39 2 72950446 72951057

Neighbor


gene id symbol gene type direction distance location
LOC110534797 LOC106610379 coding downstream 1002 72946297 ~ 72949444 (-)
LOC110534758 LOC106602178 coding downstream 11745 72934773 ~ 72938701 (-)
LOC110497279 LOC106602180 coding downstream 18979 72925307 ~ 72931467 (-)
LOC110497281 LOC106610383 coding downstream 26139 72920458 ~ 72924307 (-)
LOC110497284 LOC106602177 coding downstream 32597 72909569 ~ 72917849 (-)
LOC110533208 LOC106602162 coding upstream 5136 72956193 ~ 72960558 (-)
LOC110534768 LOC106610378 coding upstream 16751 72967808 ~ 72973302 (-)
trnae-cuc-11 NA coding upstream 23127 72974184 ~ 72974255 (-)
trnae-cuc-12 NA coding upstream 24166 72975223 ~ 72975294 (-)
trnae-cuc-13 NA coding upstream 24347 72975404 ~ 72975475 (-)
G923337 NA non-coding downstream 8960 72941273 ~ 72941486 (-)
G923335 NA non-coding downstream 17054 72933155 ~ 72933392 (-)
G923334 NA non-coding downstream 17716 72932307 ~ 72932730 (-)
G923192 LOC106610383 non-coding downstream 21978 72905577 ~ 72928468 (-)
G923185 LOC106610383 non-coding downstream 28246 72915599 ~ 72922200 (-)
G923353 NA non-coding upstream 13620 72964677 ~ 72967425 (-)
G923360 NA non-coding upstream 27434 72978491 ~ 72978932 (-)
G923365 NA non-coding upstream 92522 73043579 ~ 73043800 (-)
G923366 NA non-coding upstream 128862 73079919 ~ 73080119 (-)
LOC110514144 LOC106602209 other downstream 1186526 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1202562 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1287312 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1353301 71595152 ~ 71597145 (-)
G924041 NA other upstream 679085 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1966120 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1986848 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2102059 75053116 ~ 75056174 (-)
G925211 NA other upstream 2332934 75283991 ~ 75284673 (-)

Expression



Co-expression Network