G923353


Basic Information

Item Value
gene id G923353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72964677 ~ 72967425 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1050171
AGCacttaaaaaaatgtttattacTGGAAAACAAAAACGGTTGAGATACATAAATGGGAAATGACATTTGAAATCGCATCACATTTAGCCCTTTGGCGAACACTAGTCCTTTACAGTCAGTAAACAGCCCACATTGAAAGCGGTTAGAAAAGGTGTCAAGCAATTAACAGTATCTTCGCAATGTTGACTAACAGCGATAGTTGTGCACGCAGATGAATGGTAATTGTCCGCCACATCCGCAGTTCCTCCACCCCTGGCCCACAGCAGATTGCAGGTACATGCAGGGGTTGCTGGTTGCGGTGCTCTGGCTGTACCAGTTGGTGTAATACATTCCTGAGCGGTCGATCCACATCCAAGTTCCCTGGAGGTAGAATCCACCTATCCAGGCGGTGGCTCTGTTGGCTGTTCTGGTTATCTGTTGCAGGTAACGATACTCGGGGGAGGAGCTGGCAGAGGCCAGGCTGGCGCCCAGTTCATTGCAATGTTCCTCGGCTCCGAACCAGGACCGAGGAGTGTTCACAAACATGTAACACTTGGACTGGTAGCTGAACCATCCGTCAGGGCAGAACCTGCGTGCCGCTTTATCTTTAGGTGCTGCTGCAGCCACCTCAACTGCCTCATTCTCATCTTCTGAAAAGACACCTGGGGCGTCACTCAGCTTCTCCTCTGCTGCAGGAGCCTCAACCTCAACAGCCTCCTCTGGGGCACTTTTTGGCTCTTCTACCGCCACAGCATCGCTCTCCACAGGAACTGCTGCTGCCCTAGCAGAGAGGGCGACACAAAGTAGTGCAAAGATGATCAGAACCttcatggtggtgatgatggtggtgctgCTTGTCTTTTGTAGTAGGTAAATCACTGTTTTCTTCAGGTACTCTTCCACAGGTAGGCCAGTGATGGAGTGATAAGTGGAGATTCGTGCTCTCTTTATATACTGTTGTGTCCCGCAAACTTTCACTTATGCACTTGCCGTGAATGACGAAACAGCGTTGAACTTTGACACTTTATGGCTTTGTGTTTATACTTCAGATgacataacatagtaaaagtaaatcCAGGACACTGCCGTTAGTATGGTATGTTACGTTTCGTTtcaatttgtggatgtccatcatccgtTTCATATTATATGGTATGAATAAAAATGTGtctgatatgttacaaattgcaattcgtacaaagttatgaatttgcaaaacatatatgttacgaattccaatttttTGTGGCTAATGTTAGTTAAGTGGCTCAGTTT

Function

NR:

description
PREDICTED: CD209 antigen-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1050171 True 1255 lncRNA 0.46 9 72964677 72967425

Neighbor

gene id symbol gene type direction distance location
LOC110533208 LOC106602162 coding downstream 4119 72956193 ~ 72960558 (-)
LOC110534751 ma7d1 coding downstream 9941 72949593 ~ 72954736 (-)
LOC110534797 LOC106610379 coding downstream 15233 72946297 ~ 72949444 (-)
LOC110534758 LOC106602178 coding downstream 25976 72934773 ~ 72938701 (-)
LOC110497279 LOC106602180 coding downstream 33210 72925307 ~ 72931467 (-)
LOC110534768 LOC106610378 coding upstream 383 72967808 ~ 72973302 (-)
trnae-cuc-11 NA coding upstream 6759 72974184 ~ 72974255 (-)
trnae-cuc-12 NA coding upstream 7798 72975223 ~ 72975294 (-)
trnae-cuc-13 NA coding upstream 7979 72975404 ~ 72975475 (-)
trnae-cuc-14 NA coding upstream 8160 72975585 ~ 72975656 (-)
G923339 NA non-coding downstream 13620 72950446 ~ 72951057 (-)
G923337 NA non-coding downstream 23191 72941273 ~ 72941486 (-)
G923335 NA non-coding downstream 31285 72933155 ~ 72933392 (-)
G923334 NA non-coding downstream 31947 72932307 ~ 72932730 (-)
G923192 LOC106610383 non-coding downstream 36209 72905577 ~ 72928468 (-)
G923360 NA non-coding upstream 11066 72978491 ~ 72978932 (-)
G923365 NA non-coding upstream 76154 73043579 ~ 73043800 (-)
G923366 NA non-coding upstream 112494 73079919 ~ 73080119 (-)
G923368 NA non-coding upstream 122197 73089622 ~ 73089839 (-)
LOC110514144 LOC106602209 other downstream 1200757 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1216793 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1301543 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1367532 71595152 ~ 71597145 (-)
G924041 NA other upstream 662717 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1949752 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1970480 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2085691 75053116 ~ 75056174 (-)
G925211 NA other upstream 2316566 75283991 ~ 75284673 (-)

Expression


Co-expression Network