G923586 (LOC106602241)


Basic Information

Item Value
gene id G923586
gene name LOC106602241
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73323420 ~ 73729275 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1050463
gtgtgtgtgtgtgtgtgttacctgagtgcTGGTCTCCTGGTCCATTATTAGGAGCAGTgtctgctgtctcttctctcttggtGCTGGTCTCACCGTCTCTCAGGGTGTCTGCACTGACGTAGATATCCacaatcctctcctccatctcacctctGTTAAACTTGACCTTCTTGTTCATATCTGGCTCAGCATAGATGGCTTCAGACATCTCCAATAACTTACTGTGTTTTCTGTCCATACTCAGGTTCTGGTCCTATTGTTGACCCTGTGTCTGTTTCTGGGTCTGTTTCTGTGCGCTGACGTAGATATCCacaatcctct

Function

NR:

description
PREDICTED: CD209 antigen-like protein C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1050463 True 321 lncRNA 0.48 2 73323420 73729275

Neighbor

gene id symbol gene type direction distance location
trnak-uuu-5 NA coding upstream 185778 73137570 ~ 73137642 (+)
trnat-ugu-35 NA coding upstream 186501 73136847 ~ 73136919 (+)
trnay-gua-2 NA coding upstream 350046 72973286 ~ 72973374 (+)
LOC110534790 LOC106602162 coding upstream 355998 72964993 ~ 72967422 (+)
LOC110497276 LOC106610382 coding upstream 429518 72884337 ~ 72893902 (+)
LOC110497268 NA coding downstream 33929 73763204 ~ 73776681 (+)
LOC110497272 LOC106610442 coding downstream 84900 73814175 ~ 73818212 (+)
LOC110497273 LOC106602230 coding downstream 106832 73836107 ~ 73836921 (+)
LOC110497270 LOC106610441 coding downstream 117725 73847000 ~ 73859046 (+)
LOC110497264 LOC106602228 coding downstream 131051 73860326 ~ 73910115 (+)
G923489 NA non-coding upstream 11869 73311257 ~ 73311551 (+)
G923487 LOC106602165 non-coding upstream 18524 73304240 ~ 73304896 (+)
G923482 NA non-coding upstream 26530 73296226 ~ 73296890 (+)
G923471 NA non-coding upstream 41642 73281216 ~ 73281778 (+)
G923466 NA non-coding upstream 58593 73264600 ~ 73264827 (+)
G923627 NA non-coding downstream 34876 73764151 ~ 73819534 (+)
G923755 NA non-coding downstream 55209 73784484 ~ 73789294 (+)
G923616 NA non-coding downstream 79077 73808352 ~ 73808816 (+)
G923817 NA non-coding downstream 198637 73927912 ~ 73932834 (+)
G923769 NA non-coding downstream 315241 74044516 ~ 74063342 (+)
G923434 NA other upstream 107962 73214487 ~ 73215458 (+)
G923430 NA other upstream 119896 73200947 ~ 73203524 (+)
LOC118936484 LOC106602173 other upstream 450618 72856302 ~ 72879600 (+)
G923075 LOC106610393 other upstream 557201 72764442 ~ 72766219 (+)
LOC110497298 vps37a other upstream 675242 72637369 ~ 72648191 (+)
G924772 NA other downstream 1375342 75104617 ~ 75104970 (+)
G924787 NA other downstream 1457980 75187255 ~ 75189231 (+)
G924816 LOC106601384 other downstream 1513197 75242472 ~ 75243001 (+)
LOC110511403 LOC106610548 other downstream 1694209 75423434 ~ 75481518 (+)
G924916 NA other downstream 1794083 75523358 ~ 75525800 (+)

Expression


Co-expression Network