G925027


Basic Information

Item Value
gene id G925027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 74706082 ~ 74796698 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1052303
taccctaggtttatctgtatttctacacaccccatttagccataccctaggtttagctGTATTTatacacaccccatttagccataccctaggtttatctgtatttctaaagCCCCAAACTACTTCCTAACACTTCGAACACACCGACTGCATCACAGCTGCATAACATTTTGCGCAGCTAGGCAACTATACTGAtacaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttgcAGGTGGTCGCATGCGGTTGGACACATGGACGAGATGCTAGATAAATAGTAATGGAAATGGTAGATACTACGTAATACATTTTTCACTGAGACATCATGGTGTGTCCATCAATTTAAATCCCAACTTGTAAGGAAAGAATAAATATGAAAAAAATCCGCAATGTATTGGAC
>TU1052304
tttctacacaccccattttgccataccctaggtttatctgtatttctacacaccccatttagccataccctaggtttatctgtatttctacacaccccatttagccataccctaggtttatctgtatttctacacaccccatttagccataccctaggtttatctgtatttctacacatcccatttagccatacccgaggtttatctgtatttctacacaccccatttagccataccctaggtttatctgtatttctacacaccccatttagccataccctaggtttatctgtatttatacacaccccatttagccataccctaggtttatctgtatttatacacaccccatttagccataccctaggtttatctgtatttctacacatcccatttagccaccttttacacagctaggtaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctagacaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttacacagctaggcaactatactgatgcaggtaccttttgcAGGTGGTCGCATGCGGTTGGACACATGGACGAGATGCTAGATAAATAGTAATGGAAATGGTAGATACTACGTAATACATTTTTCACTGAGACATCATGGTGTGTCCATCAATTTAAATCCCAACTTGTAAGGAAAGAATAAATATGAAAAAAATCCGCAATGTATTGGAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586937 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1052303 False 751 lncRNA 0.41 7 74706082 74796698
TU1052304 True 949 lncRNA 0.40 5 74706082 74794289

Neighbor

gene id symbol gene type direction distance location
LOC118936765 LOC106592562 coding downstream 29256 74674780 ~ 74676826 (-)
LOC118966653 NA coding downstream 592465 74112748 ~ 74113617 (-)
LOC118936764 LOC106602208 coding downstream 597671 74093187 ~ 74108411 (-)
LOC118936763 LOC106602222 coding downstream 613434 74079315 ~ 74092648 (-)
LOC110534571 LOC106602206 coding downstream 627314 74068360 ~ 74078768 (-)
LOC110511351 LOC106597013 coding upstream 28488 74825186 ~ 74877445 (-)
LOC118936768 NA coding upstream 98036 74894734 ~ 74910153 (-)
LOC110517287 LOC106601385 coding upstream 119658 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 coding upstream 137301 74933999 ~ 74970163 (-)
LOC110516473 LOC106591540 coding upstream 239032 75035730 ~ 75085676 (-)
G924995 NA non-coding downstream 52479 74652525 ~ 74653603 (-)
G924997 NA non-coding downstream 54725 74646413 ~ 74651357 (-)
G924587 NA non-coding downstream 142067 74563612 ~ 74564015 (-)
G924487 NA non-coding downstream 220840 74399317 ~ 74485242 (-)
G924490 NA non-coding downstream 301564 74398647 ~ 74404518 (-)
G925010 NA non-coding upstream 10948 74807646 ~ 74808854 (-)
G925069 NA non-coding upstream 26295 74822993 ~ 74823300 (-)
G925071 NA non-coding upstream 34931 74831629 ~ 74832660 (-)
G925075 NA non-coding upstream 46309 74843007 ~ 75031349 (-)
G925083 NA non-coding upstream 63693 74860391 ~ 74908747 (-)
G924041 NA other downstream 1074112 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 1780348 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 2942162 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 2958198 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 3042948 71658344 ~ 71665901 (-)
LOC118936366 LOC106566139 other upstream 256418 75053116 ~ 75056174 (-)
G925211 NA other upstream 487293 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 695435 75491540 ~ 75494143 (-)

Expression


Co-expression Network