Item | Value |
---|---|
gene id | XLOC_002820 |
gene name | ints2 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007121.7 |
NCBI id | CM002894.2 |
chromosome length | 45420867 |
location | 27977373 ~ 28028999 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
ints2 | Predicted to be involved in snRNA 3'-end processing. Predicted to act upstream of or within snRNA processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS2 (integrator complex subunit 2). |
id | name | namespace |
---|---|---|
GO:0034472 | snRNA 3'-end processing | biological_process |
GO:0016180 | snRNA processing | biological_process |
GO:0032039 | integrator complex | cellular_component |
GO:0003674 | molecular_function | molecular_function |
id | description |
---|---|
ko03041 | Spliceosome |
id | description |
---|---|
ZDB-GENE-050522-148 | Predicted to be involved in snRNA 3'-end processing. Predicted to act upstream of or within snRNA processing. Predicted to be located in nucleus. Predicted to be part of integrator complex. Orthologous to human INTS2 (integrator complex subunit 2). |
ensembl_id | ENSDARG00000069085 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00005230 | False | 4973 | mRNA | 0.48 | 25 | 27977373 | 28028999 |
TCONS_00005231 | False | 1089 | mRNA | 0.44 | 3 | 28026609 | 28028998 |
TCONS_00005232 | True | 507 | mRNA | 0.52 | 2 | 28026827 | 28027490 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_002818 | auts2a | coding | downstream | 235564 | 27182704 ~ 27741809 (-) |
XLOC_002819 | AL844197.1 | coding | downstream | 563011 | 27414246 ~ 27414362 (-) |
XLOC_002817 | BX248510.3 | coding | downstream | 807301 | 27169956 ~ 27170072 (-) |
XLOC_002816 | NA | coding | downstream | 815228 | 27157937 ~ 27162145 (-) |
XLOC_002815 | cnih2 | coding | downstream | 928203 | 27028019 ~ 27049170 (-) |
XLOC_002821 | med13a | coding | upstream | 579 | 28029578 ~ 28118035 (-) |
XLOC_002822 | rps6kb1a | coding | upstream | 143345 | 28172344 ~ 28193642 (-) |
XLOC_002823 | NA | coding | upstream | 168917 | 28197916 ~ 28291989 (-) |
XLOC_002824 | NA | coding | upstream | 217836 | 28246835 ~ 28248743 (-) |
XLOC_002825 | CR392341.5 | coding | upstream | 263844 | 28292843 ~ 28292959 (-) |
XLOC_002813 | NA | non-coding | downstream | 974759 | 27000562 ~ 27002614 (-) |
XLOC_002809 | NA | non-coding | downstream | 1075068 | 26901272 ~ 26902305 (-) |
XLOC_002828 | NA | non-coding | upstream | 353086 | 28382085 ~ 28385569 (-) |
XLOC_002830 | NA | non-coding | upstream | 388652 | 28417651 ~ 28418179 (-) |