G926825


Basic Information

Item Value
gene id G926825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 77996926 ~ 77997384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1054629
CGTGGTGGTGTTGGACCGGATGGTGGTTGTGTTTGGGTTAAACTAACAGGCCGTGGTGTCTCaaggtgtgtggtggtggtgtggttgaCTCACGGTCCAGCGTCCGGCACACAGGTTCTGCACGGCTCCGGCGGAGGCTTCCAGCACGGTGGGGTTCTTACTCTCCTTCAGCAGAGAGGTGTAGACACGCACCACCTCTGGCTGGAACAACAACTCATAACCTGGAGAGACACGGAGGGAGAGGTGTTAGAAACATGGAGACATCTCATCGTCTTCTCATTTTCACCTGCACTGTTGCTGCATtcagaaatctcagacttcagtgagttcaggAGAACTG

Function

NR:

description
catenin delta-1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1054629 True 340 lncRNA 0.54 2 77996926 77997384

Neighbor

gene id symbol gene type direction distance location
LOC118936778 LOC106594846 coding upstream 50489 77937479 ~ 77946437 (+)
LOC110510687 LOC106591138 coding upstream 262435 77722229 ~ 77734491 (+)
LOC110497185 LOC106610409 coding upstream 383513 77608058 ~ 77613413 (+)
LOC118936776 LOC106591138 coding upstream 560407 77420543 ~ 77436519 (+)
LOC118936779 LOC106596936 coding upstream 613631 77380331 ~ 77383295 (+)
LOC110498611 LOC106610517 coding downstream 34250 78031634 ~ 78053204 (+)
LOC110497216 LOC106610535 coding downstream 56270 78053654 ~ 78057090 (+)
LOC110512491 LOC106610534 coding downstream 59965 78057349 ~ 78067236 (+)
LOC110497220 NA coding downstream 69936 78067320 ~ 78070325 (+)
LOC110518069 LOC106610529 coding downstream 121126 78118510 ~ 78141506 (+)
G926822 NA non-coding upstream 16773 77979666 ~ 77980153 (+)
G926795 NA non-coding upstream 23728 77956750 ~ 77973198 (+)
G926818 NA non-coding upstream 50121 77946494 ~ 77946805 (+)
G926798 NA non-coding upstream 113099 77883175 ~ 77883827 (+)
G926778 NA non-coding upstream 116197 77880517 ~ 77880729 (+)
G926826 NA non-coding downstream 47 77997431 ~ 77999995 (+)
G926829 LOC106610489 non-coding downstream 7484 78004868 ~ 78014129 (+)
G926845 NA non-coding downstream 45278 78042662 ~ 78043091 (+)
G926846 NA non-coding downstream 45830 78043214 ~ 78043477 (+)
G926847 NA non-coding downstream 46222 78043606 ~ 78048415 (+)
LOC110534594 LOC106577279 other upstream 543011 77360360 ~ 77632808 (+)
G926448 LOC105024706 other upstream 700917 77293833 ~ 77296009 (+)
LOC110531901 LOC106610543 other upstream 1112684 76869703 ~ 76884980 (+)
G924927 NA other upstream 2437327 75557460 ~ 75562892 (+)
LOC110497229 LOC106602251 other downstream 522648 78519650 ~ 78533161 (+)
G927061 LOC106602167 other downstream 778551 78775935 ~ 78787563 (+)
LOC110515636 LOC105020871 other downstream 1055107 79023569 ~ 79065796 (+)
G927584 NA other downstream 1202897 79200281 ~ 79202981 (+)
G927606 NA other downstream 1284002 79281386 ~ 79284144 (+)

Expression


Co-expression Network