Gene
RNA
| Item | Value |
|---|---|
| gene id | G926829 |
| gene name | LOC106610489 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 78004868 ~ 78014129 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: catenin delta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1054637 | True | 749 | lncRNA | 0.58 | 5 | 78004868 | 78014129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936778 | LOC106594846 | coding | upstream | 58431 | 77937479 ~ 77946437 (+) |
| LOC110510687 | LOC106591138 | coding | upstream | 270377 | 77722229 ~ 77734491 (+) |
| LOC110497185 | LOC106610409 | coding | upstream | 391455 | 77608058 ~ 77613413 (+) |
| LOC118936776 | LOC106591138 | coding | upstream | 568349 | 77420543 ~ 77436519 (+) |
| LOC118936779 | LOC106596936 | coding | upstream | 621573 | 77380331 ~ 77383295 (+) |
| LOC110498611 | LOC106610517 | coding | downstream | 17505 | 78031634 ~ 78053204 (+) |
| LOC110497216 | LOC106610535 | coding | downstream | 39525 | 78053654 ~ 78057090 (+) |
| LOC110512491 | LOC106610534 | coding | downstream | 43220 | 78057349 ~ 78067236 (+) |
| LOC110497220 | NA | coding | downstream | 53191 | 78067320 ~ 78070325 (+) |
| LOC110518069 | LOC106610529 | coding | downstream | 104381 | 78118510 ~ 78141506 (+) |
| G926826 | NA | non-coding | upstream | 4873 | 77997431 ~ 77999995 (+) |
| G926825 | NA | non-coding | upstream | 7484 | 77996926 ~ 77997384 (+) |
| G926822 | NA | non-coding | upstream | 24715 | 77979666 ~ 77980153 (+) |
| G926795 | NA | non-coding | upstream | 31670 | 77956750 ~ 77973198 (+) |
| G926818 | NA | non-coding | upstream | 58063 | 77946494 ~ 77946805 (+) |
| G926845 | NA | non-coding | downstream | 28533 | 78042662 ~ 78043091 (+) |
| G926846 | NA | non-coding | downstream | 29085 | 78043214 ~ 78043477 (+) |
| G926847 | NA | non-coding | downstream | 29477 | 78043606 ~ 78048415 (+) |
| G926867 | NA | non-coding | downstream | 169996 | 78184125 ~ 78197726 (+) |
| G926871 | NA | non-coding | downstream | 194303 | 78208432 ~ 78209231 (+) |
| LOC110534594 | LOC106577279 | other | upstream | 550953 | 77360360 ~ 77632808 (+) |
| G926448 | LOC105024706 | other | upstream | 708859 | 77293833 ~ 77296009 (+) |
| LOC110531901 | LOC106610543 | other | upstream | 1120626 | 76869703 ~ 76884980 (+) |
| G924927 | NA | other | upstream | 2445269 | 75557460 ~ 75562892 (+) |
| LOC110497229 | LOC106602251 | other | downstream | 505903 | 78519650 ~ 78533161 (+) |
| G927061 | LOC106602167 | other | downstream | 761806 | 78775935 ~ 78787563 (+) |
| LOC110515636 | LOC105020871 | other | downstream | 1038362 | 79023569 ~ 79065796 (+) |
| G927584 | NA | other | downstream | 1186152 | 79200281 ~ 79202981 (+) |
| G927606 | NA | other | downstream | 1267257 | 79281386 ~ 79284144 (+) |
