G927210


Basic Information

Item Value
gene id G927210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78048747 ~ 78049489 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055165
agccagtttataatataaatgatataatgtatgtaaactttgtTTAAACTTCATTGTCTGTATTCTGTCTCtaaatgttgtctatcactagcagcaccatatcaccaggtaacattgtgactgtgtgttgtcgatcactagcagcaccatatcaccaggtaacattgtgactgtgtgttgtcgatcactagcagcaccatatcaccaggtaacattgtgactatgtgttgtctatcactagcagcaccatatcaccaggtaacattgtgactatgtgttgtctatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTcgatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTcgatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTCGATccctagcagcaccatatcaccaggtaacattgtgACTGTGTGTAAATGTTGTCTATCA
>TU1055166
agccagtttataatataaatgatataatgtatgtaaactttgtTTAAACTTCATTGTCTGTATTCTGTCTCtaaatgttgtctatcactagcagcaccatatcaccaggtaacattgtgactatgtgttgtctatcactagcagcaccatatcaccaggtaacattgtgactgtgtgttgtcgatcactagcagcaccatatcaccaggtaacattgtgactatgtgttgtctatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTcgatcactagcagcaccatatcaccaggtaacattgtgactatgtgttgtctatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTcgatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTcgatcactagcagcaccatatcaccaggtaacattgtgACTATGTGTTGTCGATccctagcagcaccatatcaccaggtaacattgtgACTGTGTGTAAATGTTGTCTATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055165 False 493 lncRNA 0.41 3 78048747 78049489
TU1055166 True 543 lncRNA 0.41 4 78048747 78049489

Neighbor

gene id symbol gene type direction distance location
LOC110519243 LOC106610489 coding downstream 16143 77977609 ~ 78032604 (-)
LOC110497207 LOC106610467 coding downstream 81885 77963529 ~ 77966862 (-)
timm10 timm10 coding downstream 85068 77961468 ~ 77963679 (-)
LOC110497206 unc93b1 coding downstream 87670 77951359 ~ 77961077 (-)
LOC110516884 LOC105020884 coding downstream 129093 77913969 ~ 77919654 (-)
LOC110498610 LOC106610491 coding upstream 23297 78072786 ~ 78082916 (-)
LOC110498425 LOC106610496 coding upstream 245099 78294588 ~ 78300233 (-)
LOC118936782 LOC106610527 coding upstream 289534 78339023 ~ 78354474 (-)
LOC110497241 LOC106610501 coding upstream 391271 78440760 ~ 78445626 (-)
LOC110498612 LOC106610501 coding upstream 392170 78441659 ~ 78442168 (-)
G927165 NA non-coding downstream 6693 78040390 ~ 78042054 (-)
G927207 NA non-coding downstream 8557 78039966 ~ 78040190 (-)
G927203 NA non-coding downstream 13721 78034755 ~ 78035026 (-)
G927192 NA non-coding downstream 42454 78005953 ~ 78006293 (-)
G927213 NA non-coding upstream 21110 78070599 ~ 78166597 (-)
G927234 NA non-coding upstream 50491 78099980 ~ 78272481 (-)
G927247 LOC106610409 non-coding upstream 169792 78219281 ~ 78219988 (-)
G927257 NA non-coding upstream 188471 78237960 ~ 78239274 (-)
G927258 NA non-coding upstream 196503 78245992 ~ 78247643 (-)
G927157 timm10 other downstream 85095 77961348 ~ 77963652 (-)
G926732 NA other downstream 265442 77782012 ~ 77783305 (-)
G926001 NA other downstream 1650799 76396348 ~ 76399221 (-)
LOC110511405 NA other downstream 2554636 75491540 ~ 75494143 (-)
G925211 NA other downstream 2764074 75283991 ~ 75284673 (-)
G927317 LOC106610497 other upstream 332780 78382269 ~ 78434096 (-)
G927222 LOC106610501 other upstream 391816 78441305 ~ 78441982 (-)
LOC110497224 LOC106610522 other upstream 417943 78464404 ~ 78474168 (-)
LOC110497238 LOC106610518 other upstream 457588 78505862 ~ 78510097 (-)

Expression

G927210 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
End of interactive chart.

G927210 Expression in each Bioproject

Bar chart with 16 bars.
G927210 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network