Gene
RNA
| Item | Value |
|---|---|
| gene id | G927234 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 78099980 ~ 78272481 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1055207 | False | 348 | lncRNA | 0.43 | 2 | 78099980 | 78272481 |
| TU1055204 | False | 507 | lncRNA | 0.43 | 2 | 78149071 | 78272481 |
| TU1055214 | True | 659 | lncRNA | 0.43 | 2 | 78149071 | 78272481 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498610 | LOC106610491 | coding | downstream | 17064 | 78072786 ~ 78082916 (-) |
| LOC110519243 | LOC106610489 | coding | downstream | 67376 | 77977609 ~ 78032604 (-) |
| LOC110497207 | LOC106610467 | coding | downstream | 133118 | 77963529 ~ 77966862 (-) |
| timm10 | timm10 | coding | downstream | 136301 | 77961468 ~ 77963679 (-) |
| LOC110497206 | unc93b1 | coding | downstream | 138903 | 77951359 ~ 77961077 (-) |
| LOC110498425 | LOC106610496 | coding | upstream | 22107 | 78294588 ~ 78300233 (-) |
| LOC118936782 | LOC106610527 | coding | upstream | 66542 | 78339023 ~ 78354474 (-) |
| LOC110497241 | LOC106610501 | coding | upstream | 168279 | 78440760 ~ 78445626 (-) |
| LOC110498612 | LOC106610501 | coding | upstream | 169178 | 78441659 ~ 78442168 (-) |
| LOC110497224 | LOC106610522 | coding | upstream | 191923 | 78464404 ~ 78474168 (-) |
| G927210 | NA | non-coding | downstream | 50491 | 78048747 ~ 78049489 (-) |
| G927165 | NA | non-coding | downstream | 57926 | 78040390 ~ 78042054 (-) |
| G927207 | NA | non-coding | downstream | 59790 | 78039966 ~ 78040190 (-) |
| G927203 | NA | non-coding | downstream | 64954 | 78034755 ~ 78035026 (-) |
| G927192 | NA | non-coding | downstream | 93687 | 78005953 ~ 78006293 (-) |
| G927287 | NA | non-coding | upstream | 46989 | 78319470 ~ 78320058 (-) |
| G927290 | NA | non-coding | upstream | 52604 | 78325085 ~ 78325608 (-) |
| G927335 | NA | non-coding | upstream | 163200 | 78435681 ~ 78436459 (-) |
| G927336 | NA | non-coding | upstream | 163992 | 78436473 ~ 78436684 (-) |
| G927157 | timm10 | other | downstream | 136328 | 77961348 ~ 77963652 (-) |
| G926732 | NA | other | downstream | 316675 | 77782012 ~ 77783305 (-) |
| G926001 | NA | other | downstream | 1702032 | 76396348 ~ 76399221 (-) |
| LOC110511405 | NA | other | downstream | 2605869 | 75491540 ~ 75494143 (-) |
| G925211 | NA | other | downstream | 2815307 | 75283991 ~ 75284673 (-) |
| G927317 | LOC106610497 | other | upstream | 109788 | 78382269 ~ 78434096 (-) |
| G927222 | LOC106610501 | other | upstream | 168824 | 78441305 ~ 78441982 (-) |
| LOC110497238 | LOC106610518 | other | upstream | 234596 | 78505862 ~ 78510097 (-) |
