G927335


Basic Information

Item Value
gene id G927335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78435681 ~ 78436459 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055339
atctagtactgaaagcataagctacagctagctagcactgcagtgcataaaatgttgtgtatagttgactcaaagagagagaaagacagtagttgaacagttttgaacaaattcatttattccaaaatgaaggagaagcaagagataaatagagagtacattttttttcagtttcacttagCTTGCAAATGCAGCAAGCTAGATTAGCCTACTGAATGgcggatgctatgttagctagctggctatgactttaacacaacactggaactcttccaagtcaaggtaagattTTGGTGTTACTAATGTATTTCCACCGAGGCCCGCCGGTATAattgcttactgactgtacattgtaacattactgcatgattgtagcgatTTTACTAAAGTgttagttatattagctatgcCATGACATGACTTtagttaatatggtgacaacggtgtaggctgtgtgtagcgttTTGGCTTAAAAAGGTTTTTATTCGCTTGGTTAcacacagctgatgtgttgtccattgaagtccacaagcgaagggaagaggtgagaggaggagagcgcatagatgtgagaaggaatacaacatggctgctatgaaagtgaactatgtgttcaggggtgtattcattcagccgattctgttgaaaaacgtttcttaaatggaagcaaatggaacaaaacggggataaacatacctcaatttgtccaatagaaaataTTGTTTGCAAATGTTGGACTAATGATAGGGAAAATGTTAGTatcatgtacagtcgtggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055339 True 779 lncRNA 0.39 1 78435681 78436459

Neighbor

gene id symbol gene type direction distance location
LOC118936782 LOC106610527 coding downstream 81207 78339023 ~ 78354474 (-)
LOC110498425 LOC106610496 coding downstream 135448 78294588 ~ 78300233 (-)
LOC110498610 LOC106610491 coding downstream 352765 78072786 ~ 78082916 (-)
LOC110519243 LOC106610489 coding downstream 403077 77977609 ~ 78032604 (-)
LOC110497207 LOC106610467 coding downstream 468819 77963529 ~ 77966862 (-)
LOC110497241 LOC106610501 coding upstream 4301 78440760 ~ 78445626 (-)
LOC110498612 LOC106610501 coding upstream 5200 78441659 ~ 78442168 (-)
LOC110497224 LOC106610522 coding upstream 27945 78464404 ~ 78474168 (-)
LOC110497238 LOC106610518 coding upstream 69403 78505862 ~ 78510097 (-)
LOC110497231 LOC106610547 coding upstream 78840 78515299 ~ 78519538 (-)
G927290 NA non-coding downstream 110073 78325085 ~ 78325608 (-)
G927287 NA non-coding downstream 115623 78319470 ~ 78320058 (-)
G927263 NA non-coding downstream 171312 78263729 ~ 78264369 (-)
G927258 NA non-coding downstream 188038 78245992 ~ 78247643 (-)
G927336 NA non-coding upstream 14 78436473 ~ 78436684 (-)
G927216 NA non-coding upstream 888 78437347 ~ 78438623 (-)
G927343 NA non-coding upstream 97130 78533589 ~ 78533947 (-)
G927349 NA non-coding upstream 98193 78534652 ~ 78534851 (-)
G927317 LOC106610497 other downstream 1585 78382269 ~ 78434096 (-)
G927157 timm10 other downstream 472029 77961348 ~ 77963652 (-)
G926732 NA other downstream 652376 77782012 ~ 77783305 (-)
G926001 NA other downstream 2037733 76396348 ~ 76399221 (-)
LOC110511405 NA other downstream 2941570 75491540 ~ 75494143 (-)
G927222 LOC106610501 other upstream 4846 78441305 ~ 78441982 (-)
G927654 LOC106591987 other upstream 782056 79218515 ~ 79222867 (-)

Expression


Co-expression Network