G926979


Basic Information

Item Value
gene id G926979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78534469 ~ 78534910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1054826
acctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgggacctggccaagataaagcatagcagtgtgaacagacaacacagagttacacatggagtaaacaattaacaagtcaataacacagtagaaaaaagagagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattacaattttgcaaattaacactggagtgataaatgatcagatggtcatgtacaggtagagatattggtgtgcaaaagagcagaaaagtaaataaatataaacagtatggggatgaggtaggtaaaattgtgTGGGTTATTtcccgatagactatgtacagttgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtgtccaacttcagcgatttttgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1054826 True 442 lncRNA 0.39 1 78534469 78534910

Neighbor

gene id symbol gene type direction distance location
LOC110497229 LOC106602251 coding upstream 1308 78519650 ~ 78533161 (+)
LOC110497227 LOC106610465 coding upstream 32842 78495351 ~ 78501627 (+)
LOC110497234 LOC106610520 coding upstream 51616 78475963 ~ 78482853 (+)
LOC110497230 LOC106610523 coding upstream 70597 78454010 ~ 78463872 (+)
LOC118936487 LOC106602251 coding upstream 82212 78445745 ~ 78452257 (+)
LOC110497242 LOC106610480 coding downstream 214 78535124 ~ 78538309 (+)
LOC118966657 LOC106602244 coding downstream 99250 78634160 ~ 78643493 (+)
LOC110534505 NA coding downstream 189148 78724058 ~ 78727002 (+)
LOC110497250 LOC106602246 coding downstream 192089 78726999 ~ 78730160 (+)
LOC110534589 LOC106610450 coding downstream 240970 78775880 ~ 78777576 (+)
G926950 NA non-coding upstream 525 78533434 ~ 78533944 (+)
G926949 NA non-coding upstream 95355 78437274 ~ 78439114 (+)
G926948 NA non-coding upstream 97259 78436943 ~ 78437210 (+)
G926910 NA non-coding upstream 98147 78435656 ~ 78436322 (+)
G926982 NA non-coding downstream 7021 78541931 ~ 78542255 (+)
G926954 LOC106610479 non-coding downstream 21081 78555991 ~ 78558069 (+)
G926988 NA non-coding downstream 38586 78573496 ~ 78576401 (+)
G926994 NA non-coding downstream 51771 78586681 ~ 78587098 (+)
LOC110510687 LOC106591138 other upstream 809416 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1080554 77360360 ~ 77632808 (+)
G926448 LOC105024706 other upstream 1238460 77293833 ~ 77296009 (+)
LOC110531901 LOC106610543 other upstream 1650227 76869703 ~ 76884980 (+)
G927061 LOC106602167 other downstream 241025 78775935 ~ 78787563 (+)
LOC110515636 LOC105020871 other downstream 517581 79023569 ~ 79065796 (+)
G927584 NA other downstream 665371 79200281 ~ 79202981 (+)
G927606 NA other downstream 746476 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 1062735 79597075 ~ 79601686 (+)

Expression


Co-expression Network