G927013


Basic Information

Item Value
gene id G927013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78618160 ~ 78678777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1054880
ATAATAACACTGatcaccccaaggtaagagactactgctctataataacactgaccaccccaagataagagactactgctctataataacactgaccaccccaaggtaagagactactgctctataataacactgaccaccccaaggtaagagactactgctctataaaaACACTGCTCTGTAATAAATCTGAGCACTCCAAGGTAACACTACTCCTCTAGTAACACTAGAGTAGGACTGATTCTCTGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1054880 True 251 lncRNA 0.42 2 78618160 78678777

Neighbor

gene id symbol gene type direction distance location
LOC110497242 LOC106610480 coding upstream 79851 78535124 ~ 78538309 (+)
LOC110497229 LOC106602251 coding upstream 84999 78519650 ~ 78533161 (+)
LOC110497227 LOC106610465 coding upstream 116533 78495351 ~ 78501627 (+)
LOC110497234 LOC106610520 coding upstream 135307 78475963 ~ 78482853 (+)
LOC110497230 LOC106610523 coding upstream 154288 78454010 ~ 78463872 (+)
LOC110534505 NA coding downstream 45281 78724058 ~ 78727002 (+)
LOC110497250 LOC106602246 coding downstream 48222 78726999 ~ 78730160 (+)
LOC110534589 LOC106610450 coding downstream 97103 78775880 ~ 78777576 (+)
LOC118966658 NA coding downstream 107981 78786758 ~ 78787742 (+)
LOC110534603 LOC106602125 coding downstream 127017 78805794 ~ 78816438 (+)
G927006 NA non-coding upstream 10664 78606339 ~ 78607496 (+)
G926999 NA non-coding upstream 25192 78592120 ~ 78592968 (+)
G926994 NA non-coding upstream 31062 78586681 ~ 78587098 (+)
G926988 NA non-coding upstream 41759 78573496 ~ 78576401 (+)
G926954 LOC106610479 non-coding upstream 60091 78555991 ~ 78558069 (+)
G927077 NA non-coding downstream 155379 78834156 ~ 78834407 (+)
G927080 LOC106610560 non-coding downstream 170127 78848904 ~ 78854165 (+)
G927098 NA non-coding downstream 229345 78908122 ~ 78908521 (+)
G927105 NA non-coding downstream 250369 78929146 ~ 78930875 (+)
LOC110513597 LOC107093492 non-coding downstream 256540 78885272 ~ 78937306 (+)
LOC110510687 LOC106591138 other upstream 893107 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1164245 77360360 ~ 77632808 (+)
G926448 LOC105024706 other upstream 1322151 77293833 ~ 77296009 (+)
LOC110531901 LOC106610543 other upstream 1733918 76869703 ~ 76884980 (+)
G927061 LOC106602167 other downstream 97158 78775935 ~ 78787563 (+)
LOC110515636 LOC105020871 other downstream 373714 79023569 ~ 79065796 (+)
G927584 NA other downstream 521504 79200281 ~ 79202981 (+)
G927606 NA other downstream 602609 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 918868 79597075 ~ 79601686 (+)

Expression


Co-expression Network