Gene
RNA
| Item | Value |
|---|---|
| gene id | G927514 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 78965065 ~ 78976413 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1055576 | False | 232 | lncRNA | 0.47 | 3 | 78965065 | 78976413 |
| TU1055578 | True | 230 | lncRNA | 0.47 | 3 | 78965065 | 78974331 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936936 | NA | coding | downstream | 98144 | 78864883 ~ 78866921 (-) |
| LOC110498601 | smc2 | coding | downstream | 102391 | 78816477 ~ 78862674 (-) |
| LOC118936787 | NA | coding | downstream | 147100 | 78817299 ~ 78817965 (-) |
| LOC118936786 | LOC106610904 | coding | downstream | 160720 | 78803762 ~ 78804351 (-) |
| LOC118936785 | NA | coding | downstream | 208325 | 78755860 ~ 78756740 (-) |
| LOC118937053 | NA | coding | upstream | 104328 | 79080741 ~ 79080830 (-) |
| LOC118936972 | NA | coding | upstream | 105078 | 79081491 ~ 79081654 (-) |
| LOC118937011 | NA | coding | upstream | 107213 | 79083626 ~ 79083787 (-) |
| LOC118936973 | NA | coding | upstream | 109107 | 79085520 ~ 79085683 (-) |
| LOC118937012 | NA | coding | upstream | 111188 | 79087601 ~ 79087762 (-) |
| LOC110516210 | LOC106591942 | non-coding | downstream | 15397 | 78942892 ~ 79011434 (-) |
| G927477 | NA | non-coding | downstream | 23627 | 78939625 ~ 78941438 (-) |
| G927478 | NA | non-coding | downstream | 25866 | 78891942 ~ 78939199 (-) |
| G927488 | NA | non-coding | downstream | 83341 | 78881252 ~ 78881724 (-) |
| G927464 | NA | non-coding | downstream | 104480 | 78815492 ~ 78860585 (-) |
| G927522 | NA | non-coding | upstream | 10265 | 78986678 ~ 78987070 (-) |
| G927523 | NA | non-coding | upstream | 17323 | 78993736 ~ 78995164 (-) |
| G927528 | NA | non-coding | upstream | 23147 | 78999560 ~ 79001614 (-) |
| G927529 | NA | non-coding | upstream | 27262 | 79003675 ~ 79004107 (-) |
| G927538 | NA | non-coding | upstream | 30345 | 79006758 ~ 79025424 (-) |
| LOC110497238 | LOC106610518 | other | downstream | 455134 | 78505862 ~ 78510097 (-) |
| LOC110497224 | LOC106610522 | other | downstream | 491006 | 78464404 ~ 78474168 (-) |
| LOC110497241 | LOC106610501 | other | downstream | 519924 | 78440760 ~ 78445626 (-) |
| G927222 | LOC106610501 | other | downstream | 523083 | 78441305 ~ 78441982 (-) |
| G927317 | LOC106610497 | other | downstream | 530969 | 78382269 ~ 78434096 (-) |
| G927654 | LOC106591987 | other | upstream | 242102 | 79218515 ~ 79222867 (-) |
| LOC110511089 | LOC106591771 | other | upstream | 254758 | 79222288 ~ 79237169 (-) |
| G927673 | NA | other | upstream | 298280 | 79274693 ~ 79281790 (-) |
| G927893 | NA | other | upstream | 395703 | 79372116 ~ 79372872 (-) |
| G927948 | LOC106602109 | other | upstream | 579557 | 79554714 ~ 79559828 (-) |
