G927523


Basic Information

Item Value
gene id G927523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78993736 ~ 78995164 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055589
TGACTTGAGAGAGGCTGATGGTCCTTCACCTCTTTACCAATGACTTGAGAGAGGCTGATGGTCCTTCACCTCTTTACCAATGACTTGAGAGaggctgaaggtgtgtgtgtgtgtggtgtggtgtgtgtgtgtgtgtgtgtgcatgaatggtgtgtgtatggtgtgtgtacggtgtgtgtacgttgtgtgtatggtgtgtgtacggtgtgtgtgtgtgtgtacagtgtgttcctaccctgctgtgtgtgtgtacggtgtgtgtacggtgtgtgtgtgtgtgtgtgtgtgtacggtgtgtgttcctaccctgctgtgtgtgtgtacggtgtgtgtacggtgtgtgttcCTACCCTGCTGTATCCGCCCCCCGGTCTAAACACAATGTTTTACTAAATGTTGTTTTTACGTGAAATTAATGTGAAATATTTATGTTTActttaaaacaaataataattaaATGTTTTTATCAATCTGCCCATTGACTTCAGTTGAAAACTGTCTGGATAAAATGGAAAGCTTATTGACTGAAAGTGCTTTTGCGTATTGGAACAATGCAGGGGGGGTTTTCTACCACAGAAAACTACCCTTTTAACTTGTCTTAATATTCGGTGCAGATGTGTATTTCAGGGTAAAAAACCCTCACCAACCTAACTGGAATGACTAACAGTTGCTTCTTGGAAAATGCAGTTGTTCCCTCCATTTTAAAAAGTCGAATCCTTTCAGAAGAACAAGTTAACGGTTTCTCTTGCTTACATTGTATTTGACATCCAGGTATTTTTCACAAATACAGTATTTTTGTGTCCCACATTGTCTCCCGGTTACTTCTTTCACTGCAGGTGTCTCGTATACCGTAAGCTTAGCACAGTCCTCTTCCTGAGCACCGTCTTCTGACCCCACACCTCTCTTCACCCTATGAGAACAAAACACTGGCAATTATTATCAGAAACGTTCTGGATTTCTTCATGCCCTAAAAAGGTTCAAATCTCCGTCATACTTTTCGATCGATGGTGAAATGGCTTTACCGTGTAGATATCTCCTTTGTGTTGTTGGGAGAAAAACCAATCCAGGCTACATCCAACTTCTTAGCACGGACCACTTCAAGGAGAAAGTCCTAGTGATGAACAATAACATAAATGGTAGAATCAGACTTATTTTTCTCTTCTCCATATTTGGCCTCTTAGAATGTGATCTCTCTGACTGatgctcagtcacacacacacaggcaa

Function

NR:

description
C-type lectin domain family 9 member A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055589 True 1226 lncRNA 0.42 3 78993736 78995164

Neighbor

gene id symbol gene type direction distance location
LOC118936936 NA coding downstream 126815 78864883 ~ 78866921 (-)
LOC110498601 smc2 coding downstream 131062 78816477 ~ 78862674 (-)
LOC118936787 NA coding downstream 175771 78817299 ~ 78817965 (-)
LOC118936786 LOC106610904 coding downstream 189391 78803762 ~ 78804351 (-)
LOC118936785 NA coding downstream 236996 78755860 ~ 78756740 (-)
LOC118937053 NA coding upstream 85577 79080741 ~ 79080830 (-)
LOC118936972 NA coding upstream 86327 79081491 ~ 79081654 (-)
LOC118937011 NA coding upstream 88462 79083626 ~ 79083787 (-)
LOC118936973 NA coding upstream 90356 79085520 ~ 79085683 (-)
LOC118937012 NA coding upstream 92437 79087601 ~ 79087762 (-)
G927522 NA non-coding downstream 6666 78986678 ~ 78987070 (-)
G927514 NA non-coding downstream 17323 78965065 ~ 78976413 (-)
LOC110516210 LOC106591942 non-coding downstream 44068 78942892 ~ 79011434 (-)
G927477 NA non-coding downstream 52298 78939625 ~ 78941438 (-)
G927478 NA non-coding downstream 54537 78891942 ~ 78939199 (-)
G927528 NA non-coding upstream 4396 78999560 ~ 79001614 (-)
G927529 NA non-coding upstream 8511 79003675 ~ 79004107 (-)
G927538 NA non-coding upstream 11594 79006758 ~ 79025424 (-)
G927541 NA non-coding upstream 19942 79015106 ~ 79017594 (-)
G927556 NA non-coding upstream 76119 79071283 ~ 79071539 (-)
LOC110497238 LOC106610518 other downstream 483805 78505862 ~ 78510097 (-)
LOC110497224 LOC106610522 other downstream 519677 78464404 ~ 78474168 (-)
LOC110497241 LOC106610501 other downstream 548595 78440760 ~ 78445626 (-)
G927222 LOC106610501 other downstream 551754 78441305 ~ 78441982 (-)
G927317 LOC106610497 other downstream 559640 78382269 ~ 78434096 (-)
G927654 LOC106591987 other upstream 223351 79218515 ~ 79222867 (-)
LOC110511089 LOC106591771 other upstream 236007 79222288 ~ 79237169 (-)
G927673 NA other upstream 279529 79274693 ~ 79281790 (-)
G927893 NA other upstream 376952 79372116 ~ 79372872 (-)
G927948 LOC106602109 other upstream 560806 79554714 ~ 79559828 (-)

Expression


Co-expression Network