G927551


Basic Information

Item Value
gene id G927551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79068778 ~ 79069054 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055619
gtctactatcagggtagtgaccatgctggaggtgtgttactctacagtctactatcagggtagtgaccatgctggaggtgtgttactgtactctacagtctactatcagggtagtcaccatgctggaggtgtgttactctacagtctactatcagggtagtgaccatgctggaggtatgttactctacagtctactatcagggtagtgaccatgctggaggtgtgttactctacagtctactatcagggtagtgaccatgctggaggtgtgttactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055619 True 277 lncRNA 0.48 1 79068778 79069054

Neighbor

gene id symbol gene type direction distance location
LOC110515636 LOC105020871 coding upstream 2982 79023569 ~ 79065796 (+)
LOC118936790 NA coding upstream 64596 79003589 ~ 79004205 (+)
LOC118936789 NA coding upstream 72965 78994971 ~ 78995813 (+)
LOC110517676 NA coding upstream 73936 78984364 ~ 78994842 (+)
LOC110516209 NA coding upstream 126423 78939438 ~ 78942355 (+)
LOC110513572 LOC106596357 coding downstream 90453 79159507 ~ 79164674 (+)
LOC110513571 LOC106602128 coding downstream 98650 79167704 ~ 79171045 (+)
LOC118936792 NA coding downstream 138812 79207866 ~ 79209040 (+)
LOC118936979 NA coding downstream 176280 79245334 ~ 79245497 (+)
LOC118937074 NA coding downstream 178362 79247416 ~ 79247579 (+)
G927550 NA non-coding upstream 810 79067624 ~ 79067968 (+)
G927109 NA non-coding upstream 47014 78952006 ~ 79021764 (+)
G927124 NA non-coding upstream 67778 78999965 ~ 79001000 (+)
G927117 NA non-coding upstream 101056 78965254 ~ 78967722 (+)
G927555 NA non-coding downstream 1900 79070954 ~ 79071306 (+)
G927560 NA non-coding downstream 6589 79075643 ~ 79076371 (+)
G927562 NA non-coding downstream 25213 79094267 ~ 79094699 (+)
G927564 NA non-coding downstream 48210 79117264 ~ 79117800 (+)
G927566 NA non-coding downstream 75428 79144482 ~ 79145678 (+)
G927061 LOC106602167 other upstream 281215 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 538177 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1343725 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1614863 77360360 ~ 77632808 (+)
G927584 NA other downstream 131227 79200281 ~ 79202981 (+)
G927606 NA other downstream 212332 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 528591 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 657991 79727045 ~ 79782057 (+)
G928206 NA other downstream 957948 80027002 ~ 80028219 (+)

Expression


Co-expression Network