G927555


Basic Information

Item Value
gene id G927555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79070954 ~ 79071306 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055623
gtgccaccagccacctgtgCCGCACACACTCAAGTTGTAGAGCTGATGTAGGCCTACAAAAGGTAACTCATTTGAATCAAGTTATTCTAGATCAGCctttttcaaacctctcctcCGGGACCCCCAAGAGGTCCATGTTTTAGTTTTTGCCCTAAAATGAAACTAATGAACTCTATCATCAAGCCACAGATTATTTGAATCCGGTGTGTTAGTACTAGGGACATTGTATTTTATAATACTTTTATGAAAATGTTTGTGTCTACATGCCCGTGGACTACAGttgaaagctagctagctggctaaatctGGCACATTTACAGAAACGTCGATTGATGTGCAGAATCTCTCTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055623 True 353 lncRNA 0.42 1 79070954 79071306

Neighbor

gene id symbol gene type direction distance location
LOC110515636 LOC105020871 coding upstream 5158 79023569 ~ 79065796 (+)
LOC118936790 NA coding upstream 66772 79003589 ~ 79004205 (+)
LOC118936789 NA coding upstream 75141 78994971 ~ 78995813 (+)
LOC110517676 NA coding upstream 76112 78984364 ~ 78994842 (+)
LOC110516209 NA coding upstream 128599 78939438 ~ 78942355 (+)
LOC110513572 LOC106596357 coding downstream 88201 79159507 ~ 79164674 (+)
LOC110513571 LOC106602128 coding downstream 96398 79167704 ~ 79171045 (+)
LOC118936792 NA coding downstream 136560 79207866 ~ 79209040 (+)
LOC118936979 NA coding downstream 174028 79245334 ~ 79245497 (+)
LOC118937074 NA coding downstream 176110 79247416 ~ 79247579 (+)
G927551 NA non-coding upstream 1900 79068778 ~ 79069054 (+)
G927550 NA non-coding upstream 2986 79067624 ~ 79067968 (+)
G927109 NA non-coding upstream 49190 78952006 ~ 79021764 (+)
G927560 NA non-coding downstream 4337 79075643 ~ 79076371 (+)
G927562 NA non-coding downstream 22961 79094267 ~ 79094699 (+)
G927564 NA non-coding downstream 45958 79117264 ~ 79117800 (+)
G927566 NA non-coding downstream 73176 79144482 ~ 79145678 (+)
G927061 LOC106602167 other upstream 283391 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 540353 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1345901 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1617039 77360360 ~ 77632808 (+)
G927584 NA other downstream 128975 79200281 ~ 79202981 (+)
G927606 NA other downstream 210080 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 526339 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 655739 79727045 ~ 79782057 (+)
G928206 NA other downstream 955696 80027002 ~ 80028219 (+)

Expression


Co-expression Network