G927629


Basic Information

Item Value
gene id G927629
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79073619 ~ 79074332 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055715
tccccatactgtatttatttatttatcttgctcctttgcacccccagtatctctacttgtacattcatcttctgcacatctaccattccagtgtttaattgctatattgtaattacttcgccactctggcctatttattgcctttaactcccttatcctacctcatttgcactcactgtatacagacctttctactgtattattgactgtatgtttgtttactccatgtgtaacactgtgttgtttgtttgtgtcaaactgctttgttttatcttggccaggtcacagatgtaaacgagaacttgttctcaactagcttacctggttaaataaaggtgaaataattggCATGTGCTCCTACCTCGTGATACTTTTTCTTTCCATACTGTCCTCTCATCATCACTGAATAACTCCATCTCAATGTCAATCCCTGTCATTTTCACAACCGCCCTGAAAAAGCTTGGTGTGGTGTCTCTGaccccataacaacagctagtctacctagttggatcccctgaccccataacaacagctagtctacctggttggatcccctgaccccataacaacagctagtctacctggttggatcccctgactccataacaacagctagtctacctggttggatcccctgactccataacaacagctagtctacctggttggatcccctgactccataacaacagctagtctacctggttggatccc

Function

NR:

description
PREDICTED: caspase recruitment domain-containing protein 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055715 True 714 lncRNA 0.43 1 79073619 79074332

Neighbor

gene id symbol gene type direction distance location
LOC110516210 LOC106591942 coding downstream 62185 78942892 ~ 79011434 (-)
LOC118936936 NA coding downstream 206698 78864883 ~ 78866921 (-)
LOC110498601 smc2 coding downstream 210945 78816477 ~ 78862674 (-)
LOC118936787 NA coding downstream 255654 78817299 ~ 78817965 (-)
LOC118936786 LOC106610904 coding downstream 269274 78803762 ~ 78804351 (-)
LOC118937053 NA coding upstream 6409 79080741 ~ 79080830 (-)
LOC118936972 NA coding upstream 7159 79081491 ~ 79081654 (-)
LOC118937011 NA coding upstream 9294 79083626 ~ 79083787 (-)
LOC118936973 NA coding upstream 11188 79085520 ~ 79085683 (-)
LOC118937012 NA coding upstream 13269 79087601 ~ 79087762 (-)
G927628 NA non-coding downstream 183 79072915 ~ 79073436 (-)
G927556 NA non-coding downstream 2080 79071283 ~ 79071539 (-)
G927538 NA non-coding downstream 48195 79006758 ~ 79025424 (-)
G927541 NA non-coding downstream 56025 79015106 ~ 79017594 (-)
G927529 NA non-coding downstream 69512 79003675 ~ 79004107 (-)
G927631 NA non-coding upstream 2435 79076767 ~ 79079126 (-)
G927634 NA non-coding upstream 7586 79081918 ~ 79082148 (-)
G927638 NA non-coding upstream 33873 79108205 ~ 79115850 (-)
LOC118936945 NA non-coding upstream 44804 79119136 ~ 79119868 (-)
G927640 NA non-coding upstream 47800 79122132 ~ 79122409 (-)
LOC110497238 LOC106610518 other downstream 563688 78505862 ~ 78510097 (-)
LOC110497224 LOC106610522 other downstream 599560 78464404 ~ 78474168 (-)
LOC110497241 LOC106610501 other downstream 628478 78440760 ~ 78445626 (-)
G927222 LOC106610501 other downstream 631637 78441305 ~ 78441982 (-)
G927317 LOC106610497 other downstream 639523 78382269 ~ 78434096 (-)
G927654 LOC106591987 other upstream 144183 79218515 ~ 79222867 (-)
LOC110511089 LOC106591771 other upstream 156839 79222288 ~ 79237169 (-)
G927673 NA other upstream 200361 79274693 ~ 79281790 (-)
G927893 NA other upstream 297784 79372116 ~ 79372872 (-)
G927948 LOC106602109 other upstream 481638 79554714 ~ 79559828 (-)

Expression


Co-expression Network