G927562


Basic Information

Item Value
gene id G927562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79094267 ~ 79094699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055632
cacgtaaacaaacgtagtcaataacacagtagaacatgaaaatagaaagatttatgtacagtgacatggccatactcgtatttgtaattgtatctgtaaattgacaggatgatactcgcgatcagggttaaactgaagtgttttaatatgcctaaatacattttggcagaatacctcacttcacattctcactgcaaaaaaaaaaaaaaaacctgcagaaatgtctgtggaatggatctgcatcttggaacaacagaatccatcttattgacagattttgtcaggaaataagtggaccagggacatgtctgtggcgtggtaatggttgaccagggaaatgtctgtggcatggtaatgattgaccagggaaatgtctgtggcatggtaatggttgaccagggaaatgtctgtggcatggtaatggttgagcagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055632 True 433 lncRNA 0.40 1 79094267 79094699

Neighbor

gene id symbol gene type direction distance location
LOC110515636 LOC105020871 coding upstream 28471 79023569 ~ 79065796 (+)
LOC118936790 NA coding upstream 90085 79003589 ~ 79004205 (+)
LOC118936789 NA coding upstream 98454 78994971 ~ 78995813 (+)
LOC110517676 NA coding upstream 99425 78984364 ~ 78994842 (+)
LOC110516209 NA coding upstream 151912 78939438 ~ 78942355 (+)
LOC110513572 LOC106596357 coding downstream 64808 79159507 ~ 79164674 (+)
LOC110513571 LOC106602128 coding downstream 73005 79167704 ~ 79171045 (+)
LOC118936792 NA coding downstream 113167 79207866 ~ 79209040 (+)
LOC118936979 NA coding downstream 150635 79245334 ~ 79245497 (+)
LOC118937074 NA coding downstream 152717 79247416 ~ 79247579 (+)
G927560 NA non-coding upstream 17896 79075643 ~ 79076371 (+)
G927555 NA non-coding upstream 22961 79070954 ~ 79071306 (+)
G927551 NA non-coding upstream 25213 79068778 ~ 79069054 (+)
G927550 NA non-coding upstream 26299 79067624 ~ 79067968 (+)
G927564 NA non-coding downstream 22565 79117264 ~ 79117800 (+)
G927566 NA non-coding downstream 49783 79144482 ~ 79145678 (+)
G927571 NA non-coding downstream 70866 79165565 ~ 79166163 (+)
G927061 LOC106602167 other upstream 306704 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 563666 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1369214 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1640352 77360360 ~ 77632808 (+)
G927584 NA other downstream 105582 79200281 ~ 79202981 (+)
G927606 NA other downstream 186687 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 502946 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 632346 79727045 ~ 79782057 (+)
G928206 NA other downstream 932303 80027002 ~ 80028219 (+)

Expression


Co-expression Network