G927652



Basic Information


Item Value
gene id G927652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79170363 ~ 79170867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1055747
ttagcactgagatgcagtgtgttagaacgctgtgccactcgggagcccaatgacGTTCCGTTGGGAGTTCCATAGCTGTTCTAATGTTCTGTCAGTTCCATAGCTGTTCTGTCAGTTCCATAGCTGTTCCGTTTGCTAATCCATTGAAGTTCTGTCAATGTTCTATATTAGTTCCATTGAAGTTCTGTAGAAGTTCCGTAGCTAATCCATTGATTGTCACCTCAGCGGTTCCACAGAGGTTCTAGAACAGAGTATAAGATCAACTGTTCCAACAGCACAGAGTGTCTCATAGTTCAGGTTGGGGTACAATATAACGGGGGTATAAATCTTGAGTAAAGATTGTGCCTCGTGTACAGGGAAGGGCTGTGAAGAGGAGGTCCATCAGTGCAGGTCCAAAATTAGGAGTCCACTTTCTCCAGTGCCACAGTTCTATGGTACCGTTTACACCCTTTCTGAGCTGGGTCTCCCATGATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1055747 True 474 lncRNA 0.46 2 79170363 79170867

Neighbor


gene id symbol gene type direction distance location
LOC118937062 NA coding downstream 11926 79158274 ~ 79158437 (-)
LOC118937050 NA coding downstream 13690 79155529 ~ 79156778 (-)
LOC118937039 NA coding downstream 15490 79154710 ~ 79154873 (-)
LOC118937028 NA coding downstream 17289 79152911 ~ 79153074 (-)
LOC118937017 NA coding downstream 19088 79151112 ~ 79151275 (-)
LOC110513570 NA coding upstream 4338 79175205 ~ 79183563 (-)
LOC118936937 NA coding upstream 16368 79186013 ~ 79187776 (-)
LOC110511088 LOC106592313 coding upstream 41928 79212795 ~ 79222203 (-)
LOC110511089 LOC106591771 coding upstream 51421 79222288 ~ 79237169 (-)
LOC118936793 LOC106591370 coding upstream 120324 79291191 ~ 79330506 (-)
LOC118936994 NA non-coding downstream 24529 79144484 ~ 79145834 (-)
LOC118936950 NA non-coding downstream 31788 79137898 ~ 79138575 (-)
LOC118936946 NA non-coding downstream 39615 79130367 ~ 79130748 (-)
G927640 NA non-coding downstream 47954 79122132 ~ 79122409 (-)
G927658 NA non-coding upstream 1680 79172547 ~ 79172800 (-)
G927659 NA non-coding upstream 1948 79172815 ~ 79173031 (-)
G927647 NA non-coding upstream 21080 79191947 ~ 79194251 (-)
G927676 NA non-coding upstream 105318 79276185 ~ 79281152 (-)
LOC110497238 LOC106610518 other downstream 660432 78505862 ~ 78510097 (-)
LOC110497224 LOC106610522 other downstream 696304 78464404 ~ 78474168 (-)
LOC110497241 LOC106610501 other downstream 725222 78440760 ~ 78445626 (-)
G927222 LOC106610501 other downstream 728381 78441305 ~ 78441982 (-)
G927317 LOC106610497 other downstream 736267 78382269 ~ 78434096 (-)
G927654 LOC106591987 other upstream 47648 79218515 ~ 79222867 (-)
G927673 NA other upstream 103826 79274693 ~ 79281790 (-)
G927893 NA other upstream 201249 79372116 ~ 79372872 (-)
G927948 LOC106602109 other upstream 385103 79554714 ~ 79559828 (-)

Expression



Co-expression Network