G927658



Basic Information


Item Value
gene id G927658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79172547 ~ 79172800 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1055756
acacacacacacacacacagagcagtaaCGCAAAAAAACATCCACAGTCCCTTGTCACAGAACAGGTAAAACAAAAACAAGGTGAAGAAAAACAAACAATCAGTTCTGTTCCTTCTGCGTCGCTGATCATCAGTTCTCCCCGTCGCTAGGCAACGGTCGCGAGGCTGACCCTACAAACCAGCGTCATGGATACAGGAAATCGGCCCATGTCCGGGTGTAGCATACGGGTCAATACAAATAGGCTCTAATCCCAa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1055756 True 254 lncRNA 0.48 1 79172547 79172800

Neighbor


gene id symbol gene type direction distance location
LOC118937062 NA coding downstream 14110 79158274 ~ 79158437 (-)
LOC118937050 NA coding downstream 15874 79155529 ~ 79156778 (-)
LOC118937039 NA coding downstream 17674 79154710 ~ 79154873 (-)
LOC118937028 NA coding downstream 19473 79152911 ~ 79153074 (-)
LOC118937017 NA coding downstream 21272 79151112 ~ 79151275 (-)
LOC110513570 NA coding upstream 2405 79175205 ~ 79183563 (-)
LOC118936937 NA coding upstream 14435 79186013 ~ 79187776 (-)
LOC110511088 LOC106592313 coding upstream 39995 79212795 ~ 79222203 (-)
LOC110511089 LOC106591771 coding upstream 49488 79222288 ~ 79237169 (-)
LOC118936793 LOC106591370 coding upstream 118391 79291191 ~ 79330506 (-)
G927652 NA non-coding downstream 1680 79170363 ~ 79170867 (-)
LOC118936994 NA non-coding downstream 26713 79144484 ~ 79145834 (-)
LOC118936950 NA non-coding downstream 33972 79137898 ~ 79138575 (-)
LOC118936946 NA non-coding downstream 41799 79130367 ~ 79130748 (-)
G927659 NA non-coding upstream 15 79172815 ~ 79173031 (-)
G927647 NA non-coding upstream 19147 79191947 ~ 79194251 (-)
G927676 NA non-coding upstream 103385 79276185 ~ 79281152 (-)
G927693 NA non-coding upstream 148783 79321583 ~ 79321962 (-)
LOC110497238 LOC106610518 other downstream 662616 78505862 ~ 78510097 (-)
LOC110497224 LOC106610522 other downstream 698488 78464404 ~ 78474168 (-)
LOC110497241 LOC106610501 other downstream 727406 78440760 ~ 78445626 (-)
G927222 LOC106610501 other downstream 730565 78441305 ~ 78441982 (-)
G927317 LOC106610497 other downstream 738451 78382269 ~ 78434096 (-)
G927654 LOC106591987 other upstream 45715 79218515 ~ 79222867 (-)
G927673 NA other upstream 101893 79274693 ~ 79281790 (-)
G927893 NA other upstream 199316 79372116 ~ 79372872 (-)
G927948 LOC106602109 other upstream 383170 79554714 ~ 79559828 (-)

Expression



Co-expression Network