G927572


Basic Information

Item Value
gene id G927572
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79173530 ~ 79173863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055647
CTGAAGCAAAAGCTTGCAGACCCAGTAGCTCTCTGGGAGGAGGATTTGATATCACCAAGACCACTTTAGGTTCATACGGCATCAACTAGCTTTCTGATTGGTTTACCGGCCATCAACTAGCTTTCTGATTGGTTACCTCACATATAAAGCTAATTTAATGCAATAAGCAGATTTCCGTTGTGTGTAGTTGTGTTTTCAACTGTAATCTCAGTCCATGATTGGATCTTGGTCACCCCTTTTATATTCTTTGTCTGGTATTTCTGATCAGGTGTGTTATGATCCTAGCAGACGTGTGTGGATGAATGATCACGTAACGTGAttaacggatgtgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055647 True 334 lncRNA 0.41 1 79173530 79173863

Neighbor

gene id symbol gene type direction distance location
LOC110513571 LOC106602128 coding upstream 2485 79167704 ~ 79171045 (+)
LOC110513572 LOC106596357 coding upstream 8856 79159507 ~ 79164674 (+)
LOC110515636 LOC105020871 coding upstream 107734 79023569 ~ 79065796 (+)
LOC118936790 NA coding upstream 169348 79003589 ~ 79004205 (+)
LOC118936789 NA coding upstream 177717 78994971 ~ 78995813 (+)
LOC118936792 NA coding downstream 34003 79207866 ~ 79209040 (+)
LOC118936979 NA coding downstream 71471 79245334 ~ 79245497 (+)
LOC118937074 NA coding downstream 73553 79247416 ~ 79247579 (+)
LOC118937085 NA coding downstream 75639 79249502 ~ 79249665 (+)
LOC118937094 NA coding downstream 77725 79251588 ~ 79251751 (+)
G927571 NA non-coding upstream 7367 79165565 ~ 79166163 (+)
G927566 NA non-coding upstream 27852 79144482 ~ 79145678 (+)
G927564 NA non-coding upstream 55730 79117264 ~ 79117800 (+)
G927579 NA non-coding downstream 19163 79193026 ~ 79194260 (+)
LOC118937004 LOC106592095 non-coding downstream 44959 79218822 ~ 79318667 (+)
LOC118936978 NA non-coding downstream 102152 79276005 ~ 79292617 (+)
G927607 NA non-coding downstream 104161 79278024 ~ 79325667 (+)
G927612 NA non-coding downstream 115846 79289709 ~ 79290213 (+)
G927061 LOC106602167 other upstream 385967 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 642929 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1448477 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1719615 77360360 ~ 77632808 (+)
G927584 NA other downstream 26418 79200281 ~ 79202981 (+)
G927606 NA other downstream 107523 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 423782 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 553182 79727045 ~ 79782057 (+)
G928206 NA other downstream 853139 80027002 ~ 80028219 (+)

Expression


Co-expression Network