Gene
RNA
| Item | Value |
|---|---|
| gene id | G927579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 79193026 ~ 79194260 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1055654 | True | 510 | lncRNA | 0.48 | 2 | 79193026 | 79194260 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513571 | LOC106602128 | coding | upstream | 21981 | 79167704 ~ 79171045 (+) |
| LOC110513572 | LOC106596357 | coding | upstream | 28352 | 79159507 ~ 79164674 (+) |
| LOC110515636 | LOC105020871 | coding | upstream | 127230 | 79023569 ~ 79065796 (+) |
| LOC118936790 | NA | coding | upstream | 188844 | 79003589 ~ 79004205 (+) |
| LOC118936789 | NA | coding | upstream | 197213 | 78994971 ~ 78995813 (+) |
| LOC118936792 | NA | coding | downstream | 13606 | 79207866 ~ 79209040 (+) |
| LOC118936979 | NA | coding | downstream | 51074 | 79245334 ~ 79245497 (+) |
| LOC118937074 | NA | coding | downstream | 53156 | 79247416 ~ 79247579 (+) |
| LOC118937085 | NA | coding | downstream | 55242 | 79249502 ~ 79249665 (+) |
| LOC118937094 | NA | coding | downstream | 57328 | 79251588 ~ 79251751 (+) |
| G927572 | NA | non-coding | upstream | 19163 | 79173530 ~ 79173863 (+) |
| G927571 | NA | non-coding | upstream | 26863 | 79165565 ~ 79166163 (+) |
| G927566 | NA | non-coding | upstream | 47348 | 79144482 ~ 79145678 (+) |
| LOC118937004 | LOC106592095 | non-coding | downstream | 24562 | 79218822 ~ 79318667 (+) |
| LOC118936978 | NA | non-coding | downstream | 81755 | 79276005 ~ 79292617 (+) |
| G927607 | NA | non-coding | downstream | 83764 | 79278024 ~ 79325667 (+) |
| G927612 | NA | non-coding | downstream | 95449 | 79289709 ~ 79290213 (+) |
| G927624 | NA | non-coding | downstream | 129381 | 79323641 ~ 79323982 (+) |
| G927061 | LOC106602167 | other | upstream | 405463 | 78775935 ~ 78787563 (+) |
| LOC110497229 | LOC106602251 | other | upstream | 662425 | 78519650 ~ 78533161 (+) |
| LOC110510687 | LOC106591138 | other | upstream | 1467973 | 77722229 ~ 77734491 (+) |
| LOC110534594 | LOC106577279 | other | upstream | 1739111 | 77360360 ~ 77632808 (+) |
| G927584 | NA | other | downstream | 6021 | 79200281 ~ 79202981 (+) |
| G927606 | NA | other | downstream | 87126 | 79281386 ~ 79284144 (+) |
| LOC110514189 | LOC106593948 | other | downstream | 403385 | 79597075 ~ 79601686 (+) |
| LOC110532970 | LOC105020822 | other | downstream | 532785 | 79727045 ~ 79782057 (+) |
| G928206 | NA | other | downstream | 832742 | 80027002 ~ 80028219 (+) |
