G927626


Basic Information

Item Value
gene id G927626
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79329830 ~ 79330294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055712
TTCTAGTTTACAACAGAATAATATGAATCAAAACAAATTACATAACACAAGGCACAAAGGGTATGAAGTTACAAAAAAACAGGAGTTACTGTAAATCCTAACCAAAAACGAGGAGTTACCGTAAATCCTAACCAAAAAACAGGAGTTACTGTAAATCCTAACCAAAAATGAGGATTTACCGTAAATCCTAACCAAAAAACAGGAGTTACCGTAAATCCTAACCAAAAACCAGGTGTTACCGTAAATCCTAACCAAAAAAACAGGAGTTACGTAACTCCTAACTAAATGATCTTCACAAAGCAATACTCCATAACCCTCTACCTCTGTCACACAGGACACCCATCCACACAGAGTAActctatataatatactgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055712 True 376 lncRNA 0.35 2 79329830 79330294

Neighbor

gene id symbol gene type direction distance location
LOC118936989 NA coding upstream 45177 79284490 ~ 79284653 (+)
LOC118937003 NA coding upstream 47048 79282619 ~ 79282782 (+)
LOC118937004 LOC106592095 coding upstream 48971 79218822 ~ 79318667 (+)
LOC118937056 NA coding upstream 51124 79278543 ~ 79278706 (+)
LOC118936978 NA coding upstream 53662 79276005 ~ 79292617 (+)
LOC110516120 grk4 coding downstream 24155 79354449 ~ 79431818 (+)
LOC118936794 NA coding downstream 75539 79405833 ~ 79408226 (+)
LOC118936795 NA coding downstream 106597 79435521 ~ 79439621 (+)
LOC110511504 NA coding downstream 113093 79443387 ~ 79574541 (+)
LOC118937092 NA coding downstream 184181 79514475 ~ 79514604 (+)
G927607 NA non-coding upstream 4163 79278024 ~ 79325667 (+)
G927624 NA non-coding upstream 5848 79323641 ~ 79323982 (+)
G927612 NA non-coding upstream 39617 79289709 ~ 79290213 (+)
G927718 NA non-coding downstream 7844 79338138 ~ 79338891 (+)
G927729 NA non-coding downstream 45223 79375517 ~ 79376706 (+)
G927737 NA non-coding downstream 65533 79395827 ~ 79396244 (+)
G927711 NA non-coding downstream 102822 79433116 ~ 79434909 (+)
G927606 NA other upstream 45686 79281386 ~ 79284144 (+)
G927584 NA other upstream 126849 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 264283 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 542267 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 799229 78519650 ~ 78533161 (+)
LOC110514189 LOC106593948 other downstream 267351 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 396751 79727045 ~ 79782057 (+)
G928206 NA other downstream 696708 80027002 ~ 80028219 (+)
G928335 NA other downstream 981650 80311944 ~ 80316569 (+)
LOC110515606 LOC106597156 other downstream 1491370 80723535 ~ 80922638 (+)

Expression


Co-expression Network