G927729


Basic Information

Item Value
gene id G927729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79375517 ~ 79376706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055846
gtttatacccTGTGATTATCCTGTCAGTCTGTAAGGGCCAGCTAGATGTTGTTGTGGATGTTGAAATAATGTTGGATTAAAATATTGTTGTGTTTCTGATATGAGATGTGTGGGAAATGTCTCTAATGTAAGTTaacctctgtttcctctctctctctccctctctctccctttctctctctccctctccctctccctctctcccctcctctctctccctctccctctccctctctcccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055846 True 240 lncRNA 0.46 2 79375517 79376706

Neighbor

gene id symbol gene type direction distance location
LOC118936989 NA coding upstream 90864 79284490 ~ 79284653 (+)
LOC118937003 NA coding upstream 92735 79282619 ~ 79282782 (+)
LOC118937004 LOC106592095 coding upstream 94658 79218822 ~ 79318667 (+)
LOC118937056 NA coding upstream 96811 79278543 ~ 79278706 (+)
LOC118936978 NA coding upstream 99349 79276005 ~ 79292617 (+)
LOC118936794 NA coding downstream 29127 79405833 ~ 79408226 (+)
LOC118936795 NA coding downstream 60185 79435521 ~ 79439621 (+)
LOC110511504 NA coding downstream 66681 79443387 ~ 79574541 (+)
LOC118937092 NA coding downstream 137769 79514475 ~ 79514604 (+)
LOC118966659 NA coding downstream 203400 79580106 ~ 79581616 (+)
G927718 NA non-coding upstream 36626 79338138 ~ 79338891 (+)
G927626 NA non-coding upstream 45223 79329830 ~ 79330294 (+)
G927607 NA non-coding upstream 49850 79278024 ~ 79325667 (+)
G927624 NA non-coding upstream 51535 79323641 ~ 79323982 (+)
G927737 NA non-coding downstream 19121 79395827 ~ 79396244 (+)
G927711 NA non-coding downstream 56410 79433116 ~ 79434909 (+)
G927745 NA non-coding downstream 64549 79441255 ~ 79441499 (+)
G927606 NA other upstream 91373 79281386 ~ 79284144 (+)
G927584 NA other upstream 172536 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 309970 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 587954 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 844916 78519650 ~ 78533161 (+)
LOC110514189 LOC106593948 other downstream 220939 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 350339 79727045 ~ 79782057 (+)
G928206 NA other downstream 650296 80027002 ~ 80028219 (+)
G928335 NA other downstream 935238 80311944 ~ 80316569 (+)
LOC110515606 LOC106597156 other downstream 1444958 80723535 ~ 80922638 (+)

Expression


Co-expression Network