G927783


Basic Information

Item Value
gene id G927783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79651168 ~ 79651460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055918
GTGCTACCGCTAACtatactacagagagaggagctacCGCTAACTATACTTCAGAGAGAGGTGCTACCGCTAACtatactacagagagaggagctacCGCTAACTATACTTCAGAGAGAGgagctaccgctaactatactacagagagaggagctaccgctaactatactacagagagaggagctacCGCTAACTATACTTCAGAGAGA

Function

NR:

description
PREDICTED: adhesive plaque matrix protein-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055918 True 209 lncRNA 0.46 2 79651168 79651460

Neighbor

gene id symbol gene type direction distance location
LOC110514189 LOC106593948 coding upstream 49482 79597075 ~ 79601686 (+)
LOC118966659 NA coding upstream 69552 79580106 ~ 79581616 (+)
LOC110511504 NA coding upstream 76627 79443387 ~ 79574541 (+)
LOC118937092 NA coding upstream 136564 79514475 ~ 79514604 (+)
LOC118936795 NA coding upstream 211547 79435521 ~ 79439621 (+)
LOC118936796 NA coding downstream 46618 79698078 ~ 79700682 (+)
LOC110532970 LOC105020822 coding downstream 75601 79727045 ~ 79782057 (+)
LOC118936797 LOC106610424 coding downstream 231455 79882915 ~ 79895771 (+)
LOC118936798 LOC106610412 coding downstream 365497 80016957 ~ 80021704 (+)
LOC110516353 LOC106610561 coding downstream 702477 80353937 ~ 80358078 (+)
G927782 NA non-coding upstream 3073 79642307 ~ 79648095 (+)
G927713 NA non-coding upstream 73418 79555574 ~ 79577750 (+)
G927700 NA non-coding upstream 75218 79574739 ~ 79575950 (+)
G927764 NA non-coding upstream 88496 79562320 ~ 79562672 (+)
G927761 NA non-coding upstream 104477 79545397 ~ 79546691 (+)
G927785 NA non-coding downstream 5484 79656944 ~ 79657412 (+)
G927791 NA non-coding downstream 20650 79672110 ~ 79674388 (+)
LOC110516173 LOC106596573 non-coding downstream 50672 79584074 ~ 79703116 (+)
G927808 NA non-coding downstream 65302 79716762 ~ 79717092 (+)
G927809 NA non-coding downstream 68799 79720259 ~ 79720865 (+)
G927606 NA other upstream 367024 79281386 ~ 79284144 (+)
G927584 NA other upstream 448187 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 585621 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 863605 78775935 ~ 78787563 (+)
G928206 NA other downstream 375542 80027002 ~ 80028219 (+)
G928335 NA other downstream 660484 80311944 ~ 80316569 (+)
LOC110515606 LOC106597156 other downstream 1170204 80723535 ~ 80922638 (+)
G928731 NA other downstream 1468105 81119565 ~ 81120877 (+)

Expression


Co-expression Network