Gene
RNA
| Item | Value |
|---|---|
| gene id | G928023 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 79681462 ~ 79681855 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: solute carrier organic anion transporter family member 5A1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1056275 | True | 361 | lncRNA | 0.40 | 2 | 79681462 | 79681855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936793 | LOC106591370 | coding | downstream | 350956 | 79291191 ~ 79330506 (-) |
| LOC110511089 | LOC106591771 | coding | downstream | 444293 | 79222288 ~ 79237169 (-) |
| LOC110511088 | LOC106592313 | coding | downstream | 459259 | 79212795 ~ 79222203 (-) |
| LOC118936937 | NA | coding | downstream | 493686 | 79186013 ~ 79187776 (-) |
| LOC110513570 | NA | coding | downstream | 497899 | 79175205 ~ 79183563 (-) |
| LOC110531688 | lrpap1 | coding | upstream | 104775 | 79786630 ~ 79802558 (-) |
| LOC118936938 | LOC106610425 | coding | upstream | 408707 | 80090562 ~ 80094309 (-) |
| LOC118936799 | LOC106610425 | coding | upstream | 460839 | 80142694 ~ 80145965 (-) |
| LOC118936800 | LOC106610425 | coding | upstream | 478758 | 80160613 ~ 80163884 (-) |
| LOC110519670 | LOC106610423 | coding | upstream | 563228 | 80245083 ~ 80349169 (-) |
| G928019 | NA | non-coding | downstream | 5520 | 79673406 ~ 79675942 (-) |
| G927986 | NA | non-coding | downstream | 82099 | 79598954 ~ 79599363 (-) |
| G927944 | NA | non-coding | downstream | 101985 | 79576642 ~ 79579477 (-) |
| G927943 | NA | non-coding | downstream | 105412 | 79574822 ~ 79576050 (-) |
| G927972 | LOC106596941 | non-coding | downstream | 110775 | 79569265 ~ 79570687 (-) |
| G928032 | NA | non-coding | upstream | 17984 | 79699839 ~ 79701229 (-) |
| G928029 | NA | non-coding | upstream | 20329 | 79702184 ~ 79702554 (-) |
| G928033 | NA | non-coding | upstream | 21312 | 79703167 ~ 79711014 (-) |
| G928036 | NA | non-coding | upstream | 32421 | 79714276 ~ 79714693 (-) |
| G928038 | NA | non-coding | upstream | 34062 | 79715917 ~ 79716116 (-) |
| G927980 | LOC106591517 | other | downstream | 93597 | 79586078 ~ 79587865 (-) |
| G927948 | LOC106602109 | other | downstream | 123507 | 79554714 ~ 79559828 (-) |
| G927893 | NA | other | downstream | 308590 | 79372116 ~ 79372872 (-) |
| G927673 | NA | other | downstream | 399672 | 79274693 ~ 79281790 (-) |
| LOC110517091 | pi4k2b | other | upstream | 922914 | 80580548 ~ 80610829 (-) |
| G928558 | LOC106590778 | other | upstream | 966521 | 80648376 ~ 80652202 (-) |
| LOC110516987 | LOC106597865 | other | upstream | 971137 | 80652992 ~ 80687561 (-) |
| G929479 | NA | other | upstream | 1041640 | 80723495 ~ 80724244 (-) |
| G929489 | NA | other | upstream | 1065615 | 80747470 ~ 80747858 (-) |
