G927842


Basic Information

Item Value
gene id G927842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79809214 ~ 79809431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1055994
tggaacagtagtggagagggtagcaagttttaagttcctcggcatacacatcacagacaaactgaattggtccactcacacagacagcatcgtgaagaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaattcggcttgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctgacgggctgtatcaccgcct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1055994 True 218 lncRNA 0.50 1 79809214 79809431

Neighbor

gene id symbol gene type direction distance location
LOC110532970 LOC105020822 coding upstream 27157 79727045 ~ 79782057 (+)
LOC110516173 LOC106596573 coding upstream 106098 79584074 ~ 79703116 (+)
LOC118936796 NA coding upstream 108532 79698078 ~ 79700682 (+)
LOC110514189 LOC106593948 coding upstream 207528 79597075 ~ 79601686 (+)
LOC118966659 NA coding upstream 227598 79580106 ~ 79581616 (+)
LOC118936797 LOC106610424 coding downstream 73484 79882915 ~ 79895771 (+)
LOC118936798 LOC106610412 coding downstream 207526 80016957 ~ 80021704 (+)
LOC110516353 LOC106610561 coding downstream 544506 80353937 ~ 80358078 (+)
LOC110497187 LOC106610426 coding downstream 551596 80361027 ~ 80365186 (+)
LOC110516989 LOC103383728 coding downstream 817315 80626746 ~ 80651979 (+)
G927804 NA non-coding upstream 23515 79784422 ~ 79785699 (+)
G927829 NA non-coding upstream 52875 79755433 ~ 79756339 (+)
G927825 NA non-coding upstream 61663 79747237 ~ 79747551 (+)
G927812 NA non-coding upstream 84769 79724230 ~ 79724445 (+)
G927809 NA non-coding upstream 88349 79720259 ~ 79720865 (+)
G927849 NA non-coding downstream 16351 79825782 ~ 79826393 (+)
G927851 NA non-coding downstream 20968 79830399 ~ 79830749 (+)
G927857 NA non-coding downstream 48443 79857874 ~ 79912192 (+)
G928123 NA non-coding downstream 119137 79928568 ~ 79928778 (+)
G927606 NA other upstream 525070 79281386 ~ 79284144 (+)
G927584 NA other upstream 606233 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 743667 79023569 ~ 79065796 (+)
G928206 NA other downstream 217571 80027002 ~ 80028219 (+)
G928335 NA other downstream 502513 80311944 ~ 80316569 (+)
LOC110515606 LOC106597156 other downstream 1012233 80723535 ~ 80922638 (+)
G928731 NA other downstream 1310134 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 1375454 81067884 ~ 81313748 (+)

Expression


Co-expression Network