G927857


Basic Information

Item Value
gene id G927857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79857874 ~ 79912192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1056019
tattggaacagtggacagtctgattctgtgttgtttcttctacaggtattggaacagtggacagcctgattctgtgttgtttcttctacaggtattggaacagtggacagtctgattctgtgttgtttcttctacaggtattggaacagtggacagcctgattctatgtgttgtttcttctacaggtattggaacagtggacagtctgattctatgtgttgtttctcctacaggtattggaacagtg

Function

NR:

description
C-type lectin domain family 4 member M-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1056019 True 247 lncRNA 0.42 3 79857874 79912192

Neighbor

gene id symbol gene type direction distance location
LOC110532970 LOC105020822 coding upstream 75817 79727045 ~ 79782057 (+)
LOC110516173 LOC106596573 coding upstream 154758 79584074 ~ 79703116 (+)
LOC118936796 NA coding upstream 157192 79698078 ~ 79700682 (+)
LOC110514189 LOC106593948 coding upstream 256188 79597075 ~ 79601686 (+)
LOC118966659 NA coding upstream 276258 79580106 ~ 79581616 (+)
LOC118936798 LOC106610412 coding downstream 104765 80016957 ~ 80021704 (+)
LOC110516353 LOC106610561 coding downstream 441745 80353937 ~ 80358078 (+)
LOC110497187 LOC106610426 coding downstream 448835 80361027 ~ 80365186 (+)
LOC110516989 LOC103383728 coding downstream 714554 80626746 ~ 80651979 (+)
LOC118936381 LOC105020813 coding downstream 778826 80691018 ~ 80713764 (+)
G927851 NA non-coding upstream 27125 79830399 ~ 79830749 (+)
G927849 NA non-coding upstream 31481 79825782 ~ 79826393 (+)
G927842 NA non-coding upstream 48443 79809214 ~ 79809431 (+)
G927804 NA non-coding upstream 72175 79784422 ~ 79785699 (+)
G927829 NA non-coding upstream 101535 79755433 ~ 79756339 (+)
G928123 NA non-coding downstream 16376 79928568 ~ 79928778 (+)
G928125 NA non-coding downstream 18621 79930813 ~ 79932020 (+)
G928150 NA non-coding downstream 42156 79954348 ~ 79954554 (+)
G928163 NA non-coding downstream 67904 79980096 ~ 79980301 (+)
G928175 NA non-coding downstream 81667 79993859 ~ 80010323 (+)
G927606 NA other upstream 573730 79281386 ~ 79284144 (+)
G927584 NA other upstream 654893 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 792327 79023569 ~ 79065796 (+)
G928206 NA other downstream 114810 80027002 ~ 80028219 (+)
G928335 NA other downstream 399752 80311944 ~ 80316569 (+)
LOC110515606 LOC106597156 other downstream 909472 80723535 ~ 80922638 (+)
G928731 NA other downstream 1207373 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 1272693 81067884 ~ 81313748 (+)

Expression


Co-expression Network