Gene
RNA
| Item | Value |
|---|---|
| gene id | G928203 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 80024302 ~ 80024779 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1056517 | True | 431 | lncRNA | 0.39 | 2 | 80024302 | 80024779 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531688 | lrpap1 | coding | downstream | 221744 | 79786630 ~ 79802558 (-) |
| LOC118936793 | LOC106591370 | coding | downstream | 693796 | 79291191 ~ 79330506 (-) |
| LOC110511089 | LOC106591771 | coding | downstream | 787133 | 79222288 ~ 79237169 (-) |
| LOC110511088 | LOC106592313 | coding | downstream | 802099 | 79212795 ~ 79222203 (-) |
| LOC118936937 | NA | coding | downstream | 836526 | 79186013 ~ 79187776 (-) |
| LOC118936938 | LOC106610425 | coding | upstream | 65783 | 80090562 ~ 80094309 (-) |
| LOC118936799 | LOC106610425 | coding | upstream | 117915 | 80142694 ~ 80145965 (-) |
| LOC118936800 | LOC106610425 | coding | upstream | 135834 | 80160613 ~ 80163884 (-) |
| LOC110519670 | LOC106610423 | coding | upstream | 220304 | 80245083 ~ 80349169 (-) |
| LOC118936801 | LOC106610411 | coding | upstream | 223336 | 80248115 ~ 80249110 (-) |
| G928200 | NA | non-coding | downstream | 79 | 80023496 ~ 80024223 (-) |
| G928185 | NA | non-coding | downstream | 12748 | 79995682 ~ 80011554 (-) |
| G928184 | NA | non-coding | downstream | 16987 | 80005126 ~ 80007315 (-) |
| G928168 | NA | non-coding | downstream | 40086 | 79983990 ~ 79984216 (-) |
| G928162 | NA | non-coding | downstream | 44469 | 79979133 ~ 79979833 (-) |
| G928204 | NA | non-coding | upstream | 30 | 80024809 ~ 80025608 (-) |
| G928208 | NA | non-coding | upstream | 4029 | 80028808 ~ 80029987 (-) |
| G928213 | NA | non-coding | upstream | 10937 | 80035716 ~ 80035930 (-) |
| G928216 | NA | non-coding | upstream | 33217 | 80057996 ~ 80058256 (-) |
| G928230 | NA | non-coding | upstream | 45967 | 80070746 ~ 80073410 (-) |
| G927980 | LOC106591517 | other | downstream | 436437 | 79586078 ~ 79587865 (-) |
| G927948 | LOC106602109 | other | downstream | 466347 | 79554714 ~ 79559828 (-) |
| G927893 | NA | other | downstream | 651430 | 79372116 ~ 79372872 (-) |
| G927673 | NA | other | downstream | 742512 | 79274693 ~ 79281790 (-) |
| LOC110517091 | pi4k2b | other | upstream | 579990 | 80580548 ~ 80610829 (-) |
| G928558 | LOC106590778 | other | upstream | 623597 | 80648376 ~ 80652202 (-) |
| LOC110516987 | LOC106597865 | other | upstream | 628213 | 80652992 ~ 80687561 (-) |
| G929479 | NA | other | upstream | 698716 | 80723495 ~ 80724244 (-) |
| G929489 | NA | other | upstream | 722691 | 80747470 ~ 80747858 (-) |
