G928215


Basic Information

Item Value
gene id G928215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 80057945 ~ 80058396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1056539
TAAAGATATTTGGATTAAAATATGTCACAAtagacagggctctggtcaacagtagtgaactatgtcacaatagacagggctctggtcaacagtagtgaactatgtcacaatagacagggctctggtcaagagtagtgaaCTATGAAtagacagggctctggtcaacagtagtgaactatgtcacaatagacaaggctctggtcaacagtagtgaactatgtcacaatagacagggctctggtcaacagtagtgaactatgtcacaatagacagggctctggtcaacagtagtgaactatgtcacaATAGACAatgctctggtcaacagtagtgaactatgaatagatagggctctggtcaacagtagtgaactatgtcacaatacacaaggctctggtcaacagtagtgaactatgtcaTAATAGACAAGGctgtggtcaacagtagtgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1056539 True 452 lncRNA 0.42 1 80057945 80058396

Neighbor

gene id symbol gene type direction distance location
LOC118936798 LOC106610412 coding upstream 36241 80016957 ~ 80021704 (+)
LOC118936797 LOC106610424 coding upstream 162174 79882915 ~ 79895771 (+)
LOC110532970 LOC105020822 coding upstream 275888 79727045 ~ 79782057 (+)
LOC118936796 NA coding upstream 357263 79698078 ~ 79700682 (+)
LOC110514189 LOC106593948 coding upstream 456259 79597075 ~ 79601686 (+)
LOC110516353 LOC106610561 coding downstream 295541 80353937 ~ 80358078 (+)
LOC110497187 LOC106610426 coding downstream 302631 80361027 ~ 80365186 (+)
LOC110516989 LOC103383728 coding downstream 568350 80626746 ~ 80651979 (+)
LOC118936381 LOC105020813 coding downstream 632622 80691018 ~ 80713764 (+)
LOC110515606 LOC106597156 coding downstream 665139 80723535 ~ 80922638 (+)
G928205 NA non-coding upstream 27530 80028304 ~ 80030415 (+)
G928207 NA non-coding upstream 31832 80025905 ~ 80026113 (+)
G928198 NA non-coding upstream 34544 80023162 ~ 80023401 (+)
G928175 NA non-coding upstream 47622 79993859 ~ 80010323 (+)
G928163 NA non-coding upstream 77644 79980096 ~ 79980301 (+)
G928217 NA non-coding downstream 193 80058589 ~ 80060144 (+)
G928221 NA non-coding downstream 4598 80062994 ~ 80063197 (+)
G928222 NA non-coding downstream 4914 80063310 ~ 80064376 (+)
G928233 NA non-coding downstream 19140 80077536 ~ 80102702 (+)
G928238 NA non-coding downstream 33181 80091577 ~ 80184154 (+)
G928206 NA other upstream 29726 80027002 ~ 80028219 (+)
G927606 NA other upstream 773801 79281386 ~ 79284144 (+)
G927584 NA other upstream 854964 79200281 ~ 79202981 (+)
G928335 NA other downstream 253548 80311944 ~ 80316569 (+)
G928731 NA other downstream 1061169 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 1126489 81067884 ~ 81313748 (+)
LOC118936811 LOC106593215 other downstream 1180701 81239097 ~ 81247351 (+)

Expression


Co-expression Network