G928257


Basic Information

Item Value
gene id G928257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 80220724 ~ 80245858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1056594
tgttccaatacctgtagaagaaacaacacatagaatcaggctgtccactgttccaatacctgtagaagaaacaacacagaatcagactgtccactgttccaatacctgtagaagaaacaacacagaatcaggctctccactgttccaataactgtagaagaaacaacacagaatcaggctgtccactgttccaatacctgtaggagaaacaacacatagaatcaggctgtccactgttccaatac

Function

NR:

description
C-type lectin domain family 4 member M-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1056594 True 245 lncRNA 0.42 2 80220724 80245858

Neighbor

gene id symbol gene type direction distance location
LOC118936798 LOC106610412 coding upstream 199020 80016957 ~ 80021704 (+)
LOC118936797 LOC106610424 coding upstream 324953 79882915 ~ 79895771 (+)
LOC110532970 LOC105020822 coding upstream 438667 79727045 ~ 79782057 (+)
LOC118936796 NA coding upstream 520042 79698078 ~ 79700682 (+)
LOC110514189 LOC106593948 coding upstream 619038 79597075 ~ 79601686 (+)
LOC110516353 LOC106610561 coding downstream 108079 80353937 ~ 80358078 (+)
LOC110497187 LOC106610426 coding downstream 115169 80361027 ~ 80365186 (+)
LOC110516989 LOC103383728 coding downstream 380888 80626746 ~ 80651979 (+)
LOC118936381 LOC105020813 coding downstream 445160 80691018 ~ 80713764 (+)
LOC110515606 LOC106597156 coding downstream 477677 80723535 ~ 80922638 (+)
G928238 NA non-coding upstream 36570 80091577 ~ 80184154 (+)
G928255 NA non-coding upstream 50802 80169560 ~ 80169922 (+)
G928233 NA non-coding upstream 118022 80077536 ~ 80102702 (+)
G928222 NA non-coding upstream 156348 80063310 ~ 80064376 (+)
G928221 NA non-coding upstream 157527 80062994 ~ 80063197 (+)
G928265 NA non-coding downstream 14873 80260731 ~ 80266147 (+)
G928337 NA non-coding downstream 74956 80320814 ~ 80321080 (+)
G928340 NA non-coding downstream 85727 80331585 ~ 80331930 (+)
G928367 NA non-coding downstream 147378 80393236 ~ 80394414 (+)
G928402 NA non-coding downstream 194685 80440543 ~ 80459725 (+)
G928206 NA other upstream 192505 80027002 ~ 80028219 (+)
G927606 NA other upstream 936580 79281386 ~ 79284144 (+)
G927584 NA other upstream 1017743 79200281 ~ 79202981 (+)
G928335 NA other downstream 66086 80311944 ~ 80316569 (+)
G928731 NA other downstream 873707 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 939027 81067884 ~ 81313748 (+)
LOC118936811 LOC106593215 other downstream 993239 81239097 ~ 81247351 (+)

Expression


Co-expression Network