Gene
RNA
| Item | Value |
|---|---|
| gene id | G928417 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 80476294 ~ 80476524 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histidine-rich glycoprotein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1056809 | True | 231 | lncRNA | 0.39 | 1 | 80476294 | 80476524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519670 | LOC106610423 | coding | downstream | 127125 | 80245083 ~ 80349169 (-) |
| LOC118936801 | LOC106610411 | coding | downstream | 227184 | 80248115 ~ 80249110 (-) |
| LOC118936800 | LOC106610425 | coding | downstream | 312410 | 80160613 ~ 80163884 (-) |
| LOC118936799 | LOC106610425 | coding | downstream | 330329 | 80142694 ~ 80145965 (-) |
| LOC118936938 | LOC106610425 | coding | downstream | 381985 | 80090562 ~ 80094309 (-) |
| LOC110511271 | LOC106602098 | coding | upstream | 17572 | 80494096 ~ 80532152 (-) |
| LOC118936802 | LOC106602096 | coding | upstream | 70290 | 80546814 ~ 80575383 (-) |
| LOC110517091 | pi4k2b | coding | upstream | 104024 | 80580548 ~ 80610829 (-) |
| LOC110516987 | LOC106597865 | coding | upstream | 177429 | 80652992 ~ 80687561 (-) |
| LOC118936803 | NA | coding | upstream | 198888 | 80674420 ~ 80675884 (-) |
| G928401 | NA | non-coding | downstream | 46447 | 80428339 ~ 80429847 (-) |
| G928400 | NA | non-coding | downstream | 48017 | 80428063 ~ 80428277 (-) |
| G928399 | NA | non-coding | downstream | 54867 | 80421074 ~ 80421427 (-) |
| G928383 | NA | non-coding | downstream | 59809 | 80375766 ~ 80416485 (-) |
| G928511 | NA | non-coding | upstream | 13870 | 80490394 ~ 80490691 (-) |
| G928514 | NA | non-coding | upstream | 101268 | 80577792 ~ 80578897 (-) |
| G928535 | NA | non-coding | upstream | 107128 | 80583652 ~ 80585927 (-) |
| G928536 | NA | non-coding | upstream | 113592 | 80590116 ~ 80591721 (-) |
| G928537 | NA | non-coding | upstream | 117678 | 80594202 ~ 80595160 (-) |
| G927980 | LOC106591517 | other | downstream | 888429 | 79586078 ~ 79587865 (-) |
| G927948 | LOC106602109 | other | downstream | 918339 | 79554714 ~ 79559828 (-) |
| G927893 | NA | other | downstream | 1103422 | 79372116 ~ 79372872 (-) |
| G927673 | NA | other | downstream | 1194504 | 79274693 ~ 79281790 (-) |
| LOC110511089 | LOC106591771 | other | downstream | 1244714 | 79222288 ~ 79237169 (-) |
| G928558 | LOC106590778 | other | upstream | 171852 | 80648376 ~ 80652202 (-) |
| G929479 | NA | other | upstream | 246971 | 80723495 ~ 80724244 (-) |
| G929489 | NA | other | upstream | 270946 | 80747470 ~ 80747858 (-) |
