G928418


Basic Information

Item Value
gene id G928418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 80478396 ~ 80478668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1056810
tctactgttgaccaggacctataaagctatactgttgaccaggacccatagagctctactgttgaccaggacctattagagctctactgttaaccaggacctattagagctctactgttgaccaggacctattagtgctctactgttgaccatgaCCTATTAGAGCtatactgttgaccaggacctattagagctctactgttgaccaggacctattagagctctactgttgaccaggacacatagagCTCTAATGTTGACCAGGATCTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1056810 True 273 lncRNA 0.45 1 80478396 80478668

Neighbor

gene id symbol gene type direction distance location
LOC110497187 LOC106610426 coding upstream 113210 80361027 ~ 80365186 (+)
LOC110516353 LOC106610561 coding upstream 120318 80353937 ~ 80358078 (+)
LOC118936798 LOC106610412 coding upstream 456692 80016957 ~ 80021704 (+)
LOC118936797 LOC106610424 coding upstream 582625 79882915 ~ 79895771 (+)
LOC110532970 LOC105020822 coding upstream 696339 79727045 ~ 79782057 (+)
LOC110516989 LOC103383728 coding downstream 148078 80626746 ~ 80651979 (+)
LOC118936381 LOC105020813 coding downstream 212350 80691018 ~ 80713764 (+)
LOC110515606 LOC106597156 coding downstream 244867 80723535 ~ 80922638 (+)
trnae-cuc-165 NA coding downstream 451428 80930096 ~ 80930167 (+)
LOC118936804 NA coding downstream 456545 80935213 ~ 80936319 (+)
G928415 NA non-coding upstream 2403 80475791 ~ 80475993 (+)
G928403 NA non-coding upstream 14644 80444801 ~ 80463752 (+)
G928402 NA non-coding upstream 18671 80440543 ~ 80459725 (+)
G928367 NA non-coding upstream 83982 80393236 ~ 80394414 (+)
G928340 NA non-coding upstream 146466 80331585 ~ 80331930 (+)
G928424 NA non-coding downstream 9414 80488082 ~ 80488541 (+)
G928427 LOC106602129 non-coding downstream 13888 80492556 ~ 80494547 (+)
G928438 NA non-coding downstream 42699 80521367 ~ 80522903 (+)
G928452 NA non-coding downstream 64898 80543566 ~ 80546602 (+)
G928455 NA non-coding downstream 89324 80567992 ~ 80568369 (+)
G928335 NA other upstream 161827 80311944 ~ 80316569 (+)
G928206 NA other upstream 450177 80027002 ~ 80028219 (+)
LOC110514189 LOC106593948 other upstream 877624 79597075 ~ 79601686 (+)
G927606 NA other upstream 1194252 79281386 ~ 79284144 (+)
G928731 NA other downstream 640897 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 706217 81067884 ~ 81313748 (+)
LOC118936811 LOC106593215 other downstream 760429 81239097 ~ 81247351 (+)
G928757 NA other downstream 798371 81277039 ~ 81330349 (+)

Expression


Co-expression Network