G928537


Basic Information

Item Value
gene id G928537
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 80594202 ~ 80595160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057006
AATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGAACTAGGTAGGGAATCAACTagATGTATTGAACTAGGTAGGGAATCAACTAGATGTATTGAACTAGGTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGGACTCGGTAGGGAATcaac
>TU1057007
aatcaactaaatgtattgaactaggtagggaatcaactaaatgtattgaactcggTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGAACTGGGTAGGGAATCAACTAGATGTATTGAACTAGGTAGGGAATCAACTAGATGTATTGAACTAGGTAGGGAATCAACTAGATGTATTGAACTCGGTAGGGAATCAACTAGATGTATTGGACTCGGTAGGGAATcaac

Function

NR:

description
uncharacterized protein LOC111197416

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057006 False 487 lncRNA 0.39 3 80594202 80595160
TU1057007 True 247 lncRNA 0.38 3 80594202 80594678

Neighbor

gene id symbol gene type direction distance location
LOC118936802 LOC106602096 coding downstream 18819 80546814 ~ 80575383 (-)
LOC110511271 LOC106602098 coding downstream 62050 80494096 ~ 80532152 (-)
LOC110519670 LOC106610423 coding downstream 245033 80245083 ~ 80349169 (-)
LOC118936801 LOC106610411 coding downstream 345092 80248115 ~ 80249110 (-)
LOC118936800 LOC106610425 coding downstream 430318 80160613 ~ 80163884 (-)
LOC110516987 LOC106597865 coding upstream 58793 80652992 ~ 80687561 (-)
LOC118936803 NA coding upstream 80252 80674420 ~ 80675884 (-)
trnae-cuc-166 NA coding upstream 335152 80930312 ~ 80930383 (-)
LOC118936805 LOC106591917 coding upstream 422204 81017364 ~ 81027020 (-)
LOC118966660 LOC106592710 coding upstream 431933 81027093 ~ 81047680 (-)
G928536 NA non-coding downstream 2481 80590116 ~ 80591721 (-)
G928535 NA non-coding downstream 8275 80583652 ~ 80585927 (-)
G928514 NA non-coding downstream 15305 80577792 ~ 80578897 (-)
G928511 NA non-coding downstream 103511 80490394 ~ 80490691 (-)
G928417 NA non-coding downstream 117678 80476294 ~ 80476524 (-)
G928544 NA non-coding upstream 29357 80624517 ~ 80625005 (-)
G928545 NA non-coding upstream 30407 80625567 ~ 80627011 (-)
G928546 NA non-coding upstream 33797 80628957 ~ 80629291 (-)
G928547 NA non-coding upstream 35105 80630265 ~ 80630569 (-)
G928548 NA non-coding upstream 35521 80630681 ~ 80631254 (-)
G927980 LOC106591517 other downstream 1006337 79586078 ~ 79587865 (-)
G927948 LOC106602109 other downstream 1036247 79554714 ~ 79559828 (-)
G927893 NA other downstream 1221330 79372116 ~ 79372872 (-)
G927673 NA other downstream 1312412 79274693 ~ 79281790 (-)
LOC110511089 LOC106591771 other downstream 1362622 79222288 ~ 79237169 (-)
LOC110517091 pi4k2b other upstream 9609 80580548 ~ 80610829 (-)
G928558 LOC106590778 other upstream 53216 80648376 ~ 80652202 (-)
G929479 NA other upstream 128335 80723495 ~ 80724244 (-)
G929489 NA other upstream 152310 80747470 ~ 80747858 (-)

Expression


Co-expression Network