G928692


Basic Information

Item Value
gene id G928692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81044379 ~ 81044982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057241
GGTCGTCCTTGTTCTTGATGAACAATCTTAAAAGGTACATTAACCCCCGTGCGCTTCAAATAGCTTCCCCAGCAGCATGGAACCAAAGGAATGATGTCAAAAGTCTAAACCCTGTTGCACTAAATTAACCTACAATAATATTTGAAAGACACGTTTTAACAGGTATGCTATTTTCAGCCAATTGTATACTATATAGTGTACTAATAGGACACTATACAATCGCTTACCAACAAAGTAGTCTGTCATCTCTGGGTCGTCCTTGAAGGGGAAGTAGCTGATCCATTGCTTTAAGTCAGCGTTGTCTAAGGTCCTCTTCCTTGTGATGTCTAGAATCGTCAGTAACTCGTAGCATGCAACCTCTCCTTTGGCCGAGACCCAGTCCAGTATTTTTCTGGTTTGGTCAAAATGGTCAACTTCAGCCTGAATTTTACTGACTTCCTCCTCGTTAAGAACCTTGCGCTGGAACAGGTTTTCCACAATGAGGGGCAGATTCTTGAGCTTTCCAATGAGATGTTGCCTTCCATTTGTAATGTACTCTAAAGCAGATTGTCTTGTAGAAGCCATGTCTCAGGTTGTTAAAATCACTTCAACACGTTGGATCTCT

Function

NR:

description
uncharacterized protein LOC109877531 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057241 True 604 lncRNA 0.42 1 81044379 81044982

Neighbor

gene id symbol gene type direction distance location
LOC110514786 LOC106592710 coding upstream 30128 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 108318 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 114212 80930096 ~ 80930167 (+)
LOC110515606 LOC106597156 coding upstream 121741 80723535 ~ 80922638 (+)
LOC118936381 LOC105020813 coding upstream 330615 80691018 ~ 80713764 (+)
LOC110530284 LOC106592313 coding downstream 172993 81217975 ~ 81220397 (+)
LOC118936811 LOC106593215 coding downstream 196652 81239097 ~ 81247351 (+)
LOC110510686 LOC106597603 coding downstream 328601 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 441614 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 458227 81503209 ~ 81504564 (+)
G928685 NA non-coding upstream 26737 81016803 ~ 81017642 (+)
G928678 NA non-coding upstream 70167 80971875 ~ 80974212 (+)
G928674 NA non-coding upstream 99432 80943409 ~ 80944947 (+)
G928615 NA non-coding upstream 104096 80939182 ~ 80940283 (+)
G928697 NA non-coding downstream 15594 81060576 ~ 81060918 (+)
G928701 NA non-coding downstream 18724 81063706 ~ 81064164 (+)
G928705 LOC106594836 non-coding downstream 22902 81067884 ~ 81313748 (+)
G928713 NA non-coding downstream 28094 81073076 ~ 81077023 (+)
G928715 NA non-coding downstream 34159 81079141 ~ 81099454 (+)
G928335 NA other upstream 727810 80311944 ~ 80316569 (+)
G928206 NA other upstream 1016160 80027002 ~ 80028219 (+)
LOC110532970 LOC105020822 other upstream 1287335 79727045 ~ 79782057 (+)
LOC110514189 LOC106593948 other upstream 1443607 79597075 ~ 79601686 (+)
G928731 NA other downstream 74583 81119565 ~ 81120877 (+)
G928757 NA other downstream 232057 81277039 ~ 81330349 (+)
G928765 NA other downstream 304554 81349536 ~ 81350331 (+)

Expression


Co-expression Network