G928722


Basic Information

Item Value
gene id G928722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81100894 ~ 81107959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057302
ggactcacgcgtagtgctagccctaaacacacacagacagagcaggactcacgcgtagtgctagccctaaacacacacagacagagcaggactcacgcgtagtgctagccctaaacacacacagacagagcaggactcacgcgtagtgctagccctaaacacacacagacagagcaggactcacgcgtagtgctagccctaaacacacacagacagagcaggactcacgcgtagtgctagccctaaacacacacagacagagcaggactCACGCGTAGGCCTCGAAGTCTCCGTTGTTGATGGATTCGATCAGCTGCTCTGTGACTTTGATGATCTCCTGCTTCCGAGctggaaacacacaaacacaacatgacCACAACATGACCACAACGTCACCACAATCTCACCACAACGTCACCACAACCTCAGGTCAACATTAGCCCAACAACACAATCTGACATACATTAAATCAGGGCTGTTAAATAGATCATCAGATTACtatatcatgtgatgtggttagttgatATGTTAAATAgatcatcagattactacatcatgtgatgtggttagttaatagatcagattactacatcatgtgatgtggttagttaatagatcatcagattactacatcatgtgatgtggttagttaatagatcagattactacatcatgtgatgtggttagttaatagatcatcagattactacatcatgtgatgtggttagttaatagatcatcagattactacatcatgtgatgtggttagttaatagatcagattactacatcatgtgatgtggttagttaatagatcatcagattactacatcatgtgatgtggttagttaatagatcagattactacatcatgtgatgtggttagttaatagatcatcagattactacatcatgtgatgtggttagttaatagatcagattactacatcatgtggtgtggttagttaataga

Function

NR:

description
PREDICTED: calcium/calmodulin-dependent protein kinase type II subunit beta-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057302 True 973 lncRNA 0.41 2 81100894 81107959

Neighbor

gene id symbol gene type direction distance location
LOC110514786 LOC106592710 coding upstream 86643 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 164833 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 170727 80930096 ~ 80930167 (+)
LOC110515606 LOC106597156 coding upstream 178256 80723535 ~ 80922638 (+)
LOC118936381 LOC105020813 coding upstream 387130 80691018 ~ 80713764 (+)
LOC110530284 LOC106592313 coding downstream 110016 81217975 ~ 81220397 (+)
LOC118936811 LOC106593215 coding downstream 133675 81239097 ~ 81247351 (+)
LOC110510686 LOC106597603 coding downstream 265624 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 378637 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 395250 81503209 ~ 81504564 (+)
G928715 NA non-coding upstream 1440 81079141 ~ 81099454 (+)
G928717 NA non-coding upstream 15255 81080994 ~ 81085639 (+)
G928713 NA non-coding upstream 23871 81073076 ~ 81077023 (+)
G928701 NA non-coding upstream 36730 81063706 ~ 81064164 (+)
G928697 NA non-coding upstream 39976 81060576 ~ 81060918 (+)
G928726 NA non-coding downstream 6762 81114721 ~ 81115159 (+)
G928728 NA non-coding downstream 8651 81116610 ~ 81117922 (+)
G928736 NA non-coding downstream 25635 81133594 ~ 81135505 (+)
G928741 NA non-coding downstream 42806 81150765 ~ 81154590 (+)
G928771 NA non-coding downstream 81456 81189415 ~ 81407283 (+)
G928335 NA other upstream 784325 80311944 ~ 80316569 (+)
G928206 NA other upstream 1072675 80027002 ~ 80028219 (+)
LOC110532970 LOC105020822 other upstream 1343850 79727045 ~ 79782057 (+)
LOC110514189 LOC106593948 other upstream 1500122 79597075 ~ 79601686 (+)
G928731 NA other downstream 11606 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 76926 81067884 ~ 81313748 (+)
G928757 NA other downstream 169080 81277039 ~ 81330349 (+)
G928765 NA other downstream 241577 81349536 ~ 81350331 (+)

Expression


Co-expression Network