G928741


Basic Information

Item Value
gene id G928741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81150765 ~ 81154590 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057326
attcatgatgatgtactggtcgatctaactatagctagactattcatgatgatgtactggttgatctaactatagctagactattcatgatgatgtactggttgatctattcatgacgatgtactggttgatctaactatagctagactattcatgatgatgtactggttgatctattcatgacgatgtactggttgatctattcatgatgatgcactggttgatctaactatagctagactattcatgatgatgtactggttgatctaactatagctagactattcatggtgatgtactggttgatctattcatgacgatgtactggttgatctaactatagctagactattcatgatgatgtactggttgatctattcatggtgatgtactggttgatctattcatgatgatgtactggttgatctattcatgatgatgtactggttgatctattcatggtgatgtactggttgatctattcatggtgatgtactggttgatctattcatggtgatgtactggttgatctaactatagctagactattcatgatgatgtactggttgatctaactatagctagactattcatggtgatgtactggttgatctaactatagctagactattcatggtgatgtactggttgatctattcatgATGACGTACCTGTTAATCTAACTATAGCTAGACGGGTTGTTTTTGAAGTGCTCTGAGATTCTTATGAAAAGTGCAATAGAAACGTGATGCATTATTCTTGTTATTATTTTGGTGTCTCCTCTGTGATTAATCACACAGTCAGTGGTCCATACATCACGTTCATAAATCACTTTATAGAGACAGATATCACACCttagatgacacacacacacaccttagataacacacacaccttagataacacacacacacacaccttagataacacacacacacacaccttcgatACAGccatatgaaataacacacacctgACTGCGAGAAAGAACTGGAAGACAGTGatatagcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcctacctGGCGTCAGCCTCACTGTAGTACTCCCTGGCTACGATGTCCTCAAACAGCTCTCCTCCAGTCACCctgaaaacacacagacacacagacagacacacagacacacacacagacagacagacacacacacagacacacacacagacacacagacacacagacacacagacagatacagacacatacacacacagacagacacacagacacagacacacagacacacacagacacacacacaggcacacagaaaaacagacacacacagaaacacacagacacacagagacacacaccaagGTGGTTTACCTCtctagtgtgtgtctgtggtttaGCACTAGTTATTATTCCTGACAAAACCAGCACCTGTCATCCCTGGATCAGTACCTGGATCTACACTtactgagagatggagggatgagatacACATAGATATGAGAGGTGTACTCACAGATCAAACAGCAGGAAGTGGAAGCCCTCCTCTAATATGAGAGGTAGAGGTGTACTCACAGATCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057326 True 1599 lncRNA 0.41 6 81150765 81154590

Neighbor

gene id symbol gene type direction distance location
LOC110514786 LOC106592710 coding upstream 136514 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 214704 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 220598 80930096 ~ 80930167 (+)
LOC110515606 LOC106597156 coding upstream 228127 80723535 ~ 80922638 (+)
LOC118936381 LOC105020813 coding upstream 437001 80691018 ~ 80713764 (+)
LOC110530284 LOC106592313 coding downstream 63385 81217975 ~ 81220397 (+)
LOC118936811 LOC106593215 coding downstream 87044 81239097 ~ 81247351 (+)
LOC110510686 LOC106597603 coding downstream 218993 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 332006 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 348619 81503209 ~ 81504564 (+)
G928736 NA non-coding upstream 15260 81133594 ~ 81135505 (+)
G928728 NA non-coding upstream 32843 81116610 ~ 81117922 (+)
G928726 NA non-coding upstream 35606 81114721 ~ 81115159 (+)
G928722 NA non-coding upstream 42806 81100894 ~ 81107959 (+)
G928715 NA non-coding upstream 51311 81079141 ~ 81099454 (+)
G928771 NA non-coding downstream 34825 81189415 ~ 81407283 (+)
G928781 NA non-coding downstream 36959 81191549 ~ 81192117 (+)
G928799 NA non-coding downstream 56005 81210595 ~ 81211246 (+)
G928800 NA non-coding downstream 56903 81211493 ~ 81212714 (+)
G928763 LOC106592908 non-coding downstream 67595 81222185 ~ 81222608 (+)
G928731 NA other upstream 29888 81119565 ~ 81120877 (+)
G928335 NA other upstream 834196 80311944 ~ 80316569 (+)
G928206 NA other upstream 1122546 80027002 ~ 80028219 (+)
LOC110532970 LOC105020822 other upstream 1393721 79727045 ~ 79782057 (+)
G928705 LOC106594836 other downstream 30295 81067884 ~ 81313748 (+)
G928757 NA other downstream 122449 81277039 ~ 81330349 (+)
G928765 NA other downstream 194946 81349536 ~ 81350331 (+)

Expression


Co-expression Network