G928800


Basic Information

Item Value
gene id G928800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81211493 ~ 81212714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057406
atccattatattgaccaggtactatagtggctGCTCTATCAGATTATCCATTATAatgaccaggtactatagtggctGCTATAtcagattatccattatattgaccaggtactatagtggctGCTATATCAGagtatccattatattgaccaggtactatagtggctGCTGTAtcagattatccattatattgaccaggtactatagtggctGCTGTATCAGagtatccattatattgaccaggtactatagtATAGGCTCTAtcagattatccattatattgaccaggtactatagtggctGCTCTATCAGATTACCCATGATattgaccaggtactatagtggctGCTCTATCAGATTAcccattatattgaccaggtactatagtggctGCTGTATCAGATTATCC

Function

NR:

description
complement C3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057406 True 409 lncRNA 0.38 5 81211493 81212714

Neighbor

gene id symbol gene type direction distance location
LOC110514786 LOC106592710 coding upstream 197242 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 275432 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 281326 80930096 ~ 80930167 (+)
LOC110515606 LOC106597156 coding upstream 288855 80723535 ~ 80922638 (+)
LOC118936381 LOC105020813 coding upstream 497729 80691018 ~ 80713764 (+)
LOC110530284 LOC106592313 coding downstream 5261 81217975 ~ 81220397 (+)
LOC118936811 LOC106593215 coding downstream 28920 81239097 ~ 81247351 (+)
LOC110510686 LOC106597603 coding downstream 160869 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 273882 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 290495 81503209 ~ 81504564 (+)
G928799 NA non-coding upstream 247 81210595 ~ 81211246 (+)
G928781 NA non-coding upstream 19376 81191549 ~ 81192117 (+)
G928741 NA non-coding upstream 56903 81150765 ~ 81154590 (+)
G928736 NA non-coding upstream 75988 81133594 ~ 81135505 (+)
G928728 NA non-coding upstream 93571 81116610 ~ 81117922 (+)
G928763 LOC106592908 non-coding downstream 9471 81222185 ~ 81222608 (+)
G928805 NA non-coding downstream 15817 81228531 ~ 81235627 (+)
G928808 NA non-coding downstream 31407 81244121 ~ 81244714 (+)
G928810 NA non-coding downstream 35670 81248384 ~ 81248919 (+)
G928731 NA other upstream 90616 81119565 ~ 81120877 (+)
G928335 NA other upstream 894924 80311944 ~ 80316569 (+)
G928206 NA other upstream 1183274 80027002 ~ 80028219 (+)
LOC110532970 LOC105020822 other upstream 1454449 79727045 ~ 79782057 (+)
G928757 NA other downstream 64325 81277039 ~ 81330349 (+)
G928765 NA other downstream 136822 81349536 ~ 81350331 (+)

Expression


Co-expression Network