G928808


Basic Information

Item Value
gene id G928808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81244121 ~ 81244714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057415
gtggggtgatgaaggtcctcatgagtcgtgttcagtggggtgatgaaggtcttcatgagtcgtgttcagtggggtgatgaaggtcttcatgagtcgtgttcagtggggtgatgaaggtcttcatgagtcgtgttcagtggggtgatgaaggtcttcatgagtcgtgttcagtggggtgatgaaggtcttcatgagtcatgttcagtggggtgatgaaggt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057415 True 220 lncRNA 0.50 2 81244121 81244714

Neighbor

gene id symbol gene type direction distance location
LOC110530284 LOC106592313 coding upstream 23724 81217975 ~ 81220397 (+)
LOC110514786 LOC106592710 coding upstream 229870 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 308060 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 313954 80930096 ~ 80930167 (+)
LOC110515606 LOC106597156 coding upstream 321483 80723535 ~ 80922638 (+)
LOC110510686 LOC106597603 coding downstream 128869 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 241882 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 258495 81503209 ~ 81504564 (+)
LOC110513527 LOC106595035 coding downstream 281800 81526514 ~ 81534991 (+)
LOC118936818 LOC106576580 coding downstream 314030 81558744 ~ 81615329 (+)
G928805 NA non-coding upstream 8494 81228531 ~ 81235627 (+)
G928763 LOC106592908 non-coding upstream 21513 81222185 ~ 81222608 (+)
G928800 NA non-coding upstream 31407 81211493 ~ 81212714 (+)
G928799 NA non-coding upstream 32875 81210595 ~ 81211246 (+)
G928781 NA non-coding upstream 52004 81191549 ~ 81192117 (+)
LOC118936811 LOC106593215 non-coding downstream 1426 81239097 ~ 81247351 (+)
G928810 NA non-coding downstream 3670 81248384 ~ 81248919 (+)
G928706 LOC106591435 non-coding downstream 9928 81254642 ~ 81257090 (+)
G928817 NA non-coding downstream 18542 81263256 ~ 81295061 (+)
G928782 NA non-coding downstream 18728 81263442 ~ 81352839 (+)
G928731 NA other upstream 123244 81119565 ~ 81120877 (+)
G928335 NA other upstream 927552 80311944 ~ 80316569 (+)
G928206 NA other upstream 1215902 80027002 ~ 80028219 (+)
LOC110532970 LOC105020822 other upstream 1487077 79727045 ~ 79782057 (+)
G928757 NA other downstream 32325 81277039 ~ 81330349 (+)
G928765 NA other downstream 104822 81349536 ~ 81350331 (+)

Expression


Co-expression Network