G928825


Basic Information

Item Value
gene id G928825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81279615 ~ 81306974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057434
AAACATTTTTCTTCGACGATAACGTCCGTTACTTCCTCTACTTCCTTATACAAATATTTCCCGTTTCAACTAGTGATGGGTCGTTCGATAACGACAGGTTGTTTTTGAACGGATCTTTTTGGTGAACGTCGGTAACCGAATTGCATCGGTGAAAGAGCCGTTCATTTCGCTCCCTGGTTTACATACGAGGTGCTTTTTGAGCTCAAAACAACGATTACCTGCAGATAAGTTACACAATAATTCTCTGAAGAGGGTGAATCCTTACTGCAGAAACAATAAATAGTGGGCCGAGCGCGTCATTCTTGTCAAGGCTTTGTAGTGCGTAAAAAACAAACAGTTGATCTAATCATTTAAATACTAGTTATTGAAAAAAAGAAA

Function

NR:

description
SAP domain-containing ribonucleoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057434 True 378 lncRNA 0.39 2 81279615 81306974

Neighbor

gene id symbol gene type direction distance location
LOC118936811 LOC106593215 coding upstream 32264 81239097 ~ 81247351 (+)
LOC110530284 LOC106592313 coding upstream 59218 81217975 ~ 81220397 (+)
LOC110514786 LOC106592710 coding upstream 265364 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 343554 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 349448 80930096 ~ 80930167 (+)
LOC110510686 LOC106597603 coding downstream 66609 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 179622 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 196235 81503209 ~ 81504564 (+)
LOC110513527 LOC106595035 coding downstream 219540 81526514 ~ 81534991 (+)
LOC118936818 LOC106576580 coding downstream 251770 81558744 ~ 81615329 (+)
G928706 LOC106591435 non-coding upstream 22525 81254642 ~ 81257090 (+)
G928810 NA non-coding upstream 30696 81248384 ~ 81248919 (+)
G928808 NA non-coding upstream 34901 81244121 ~ 81244714 (+)
G928805 NA non-coding upstream 43988 81228531 ~ 81235627 (+)
G928840 NA non-coding downstream 16559 81323533 ~ 81353606 (+)
G928841 NA non-coding downstream 22038 81329012 ~ 81426368 (+)
G928704 LOC106592660 non-coding downstream 32759 81339733 ~ 81436602 (+)
G928710 NA non-coding downstream 33874 81340848 ~ 81436999 (+)
G928846 NA non-coding downstream 53819 81360793 ~ 81363179 (+)
G928731 NA other upstream 158738 81119565 ~ 81120877 (+)
LOC110515606 LOC106597156 other upstream 448960 80723535 ~ 80922638 (+)
G928335 NA other upstream 963046 80311944 ~ 80316569 (+)
G928206 NA other upstream 1251396 80027002 ~ 80028219 (+)
G928765 NA other downstream 42562 81349536 ~ 81350331 (+)

Expression


Co-expression Network