G928830


Basic Information

Item Value
gene id G928830
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81298367 ~ 81354229 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057441
CAGCTTCATCAGTTTAAATGTGGGATCCACCAGAGCAGCTGAAAGCAGTCCCCCTGCagagtctcctgggtgattgtagctcaggtccagctctttcaggtgggaggggtttgacctcagagctgaagACAGAGCAGCACAGCCCTCCTCTGTgaccagacagccagacagcctacagagagacacacaacagCTGTCTAGGTTGGTGTACGGGTGTCAATCATCTTGTAGGACACCAATTCATTTGTACATGACACAAATATTGTGATGAAACATCAGATTTTGAGAGTTTTTGTTTTACTAAGCTCAGTACCGATCTGAATGTAACAGCTGTACTTACCCAAGTGTGtgtagtttacagtctggatcctccagtccagcagacagcaatGTAACTCCTGAGTCCTGCAGGTCATTGTCTCTCAGCTCCAGTTGGTTCAGTTGTGAGTTGGGTGAACTCAGGACTGAGGCCAGATCTGAACAGCAACCctctgtcagaccacactgacCTAGACTAGAGGGCAGAAGAACACAAGATTAACACATGTTTAAAACATCCACATAATAACTCATACTGAAGATAATTAATTCACACTAGTGTCTGTATGTTGCAGAGTGGACTGGTTAGTCCAATacagagcagcttcactcctctGTCTCCCAGGTCATTGTAGCTGAGGTCCAGTTCTCTCAGGGGGGAGGTTGGTGTCTGCAGAGCTGAGGCCAGAGTCTCACAAGATTCATATGCGAGTTTACAGCCATG

Function

NR:

description
NACHT, LRR and PYD domains-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057441 True 763 lncRNA 0.47 3 81298367 81354229

Neighbor

gene id symbol gene type direction distance location
LOC118936811 LOC106593215 coding upstream 51016 81239097 ~ 81247351 (+)
LOC110530284 LOC106592313 coding upstream 77970 81217975 ~ 81220397 (+)
LOC110514786 LOC106592710 coding upstream 284116 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 362306 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 368200 80930096 ~ 80930167 (+)
LOC110510686 LOC106597603 coding downstream 19354 81373583 ~ 81386366 (+)
LOC110518956 LOC106595358 coding downstream 132367 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 148980 81503209 ~ 81504564 (+)
LOC110513527 LOC106595035 coding downstream 172285 81526514 ~ 81534991 (+)
LOC118936818 LOC106576580 coding downstream 204515 81558744 ~ 81615329 (+)
G928817 NA non-coding upstream 3306 81263256 ~ 81295061 (+)
G928706 LOC106591435 non-coding upstream 41277 81254642 ~ 81257090 (+)
G928810 NA non-coding upstream 49448 81248384 ~ 81248919 (+)
G928808 NA non-coding upstream 53653 81244121 ~ 81244714 (+)
G928846 NA non-coding downstream 6564 81360793 ~ 81363179 (+)
G928853 NA non-coding downstream 37484 81391713 ~ 81393673 (+)
G928750 NA non-coding downstream 52494 81406723 ~ 81439976 (+)
G928784 NA non-coding downstream 54957 81409186 ~ 81445032 (+)
G928865 NA non-coding downstream 76100 81430329 ~ 81432413 (+)
G928731 NA other upstream 177490 81119565 ~ 81120877 (+)
LOC110515606 LOC106597156 other upstream 467712 80723535 ~ 80922638 (+)
G928335 NA other upstream 981798 80311944 ~ 80316569 (+)
G928206 NA other upstream 1270148 80027002 ~ 80028219 (+)
LOC118936819 LOC106602658 other downstream 281509 81617460 ~ 81672338 (+)

Expression


Co-expression Network