G928841


Basic Information

Item Value
gene id G928841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81329012 ~ 81426368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057456
CACTTAGAACTGGTGTCTTGAGTCATTTTAGAGTCAgtggtcccctcctctctctccccagagagactcattttagagTCAgtggtcccctcctctctctccccagagagactcattttagaggccgtggtctcctcctctctctccccagagagactcatatTAGATGTAAGTCAAAACTCACTCAGCTACAATAAGAAATAACAGAACAGTCAATATTTCTGAACCTTGTTgaagaaccataaacaatgacaacacatttactatctgtggtcaaagagttcaatcagcGACTTCATATTGTATCCaacatacacagtccactatgttattaaagatacacagtccactatgttattaaagatacacagtccactatgttattaaaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057456 True 390 lncRNA 0.41 2 81329012 81426368

Neighbor

gene id symbol gene type direction distance location
LOC118936811 LOC106593215 coding upstream 81661 81239097 ~ 81247351 (+)
LOC110530284 LOC106592313 coding upstream 108615 81217975 ~ 81220397 (+)
LOC110514786 LOC106592710 coding upstream 314761 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 392951 80935213 ~ 80936319 (+)
trnae-cuc-165 NA coding upstream 398845 80930096 ~ 80930167 (+)
LOC110518956 LOC106595358 coding downstream 60228 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 76841 81503209 ~ 81504564 (+)
LOC110513527 LOC106595035 coding downstream 100146 81526514 ~ 81534991 (+)
LOC118936818 LOC106576580 coding downstream 132376 81558744 ~ 81615329 (+)
LOC118936819 LOC106602658 coding downstream 191092 81617460 ~ 81672338 (+)
G928783 LOC106594467 non-coding upstream 5509 81296632 ~ 81323503 (+)
G928826 NA non-coding upstream 12073 81289922 ~ 81316939 (+)
G928709 NA non-coding upstream 12533 81286535 ~ 81316479 (+)
G928707 NA non-coding upstream 18853 81281371 ~ 81310159 (+)
G928825 NA non-coding upstream 22038 81279615 ~ 81306974 (+)
G928865 NA non-coding downstream 3961 81430329 ~ 81432413 (+)
G928868 NA non-coding downstream 27043 81453411 ~ 81453725 (+)
G928882 NA non-coding downstream 30184 81456552 ~ 81457073 (+)
G928883 NA non-coding downstream 31368 81457736 ~ 81457950 (+)
G928885 NA non-coding downstream 41362 81467730 ~ 81469858 (+)
G928705 LOC106594836 other upstream 15264 81067884 ~ 81313748 (+)
G928731 NA other upstream 208135 81119565 ~ 81120877 (+)
LOC110515606 LOC106597156 other upstream 498357 80723535 ~ 80922638 (+)
G928335 NA other upstream 1012443 80311944 ~ 80316569 (+)
G928929 NA other downstream 227023 81653391 ~ 81654391 (+)

Expression


Co-expression Network