G928868


Basic Information

Item Value
gene id G928868
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81453411 ~ 81453725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057513
gaaccacagactggggtgaaggttcaccttccaacaggacaatgaccgtaagtgtaaccgatgtgaaatggctagctagttagcggggtgcgcgctaatatcGTTTCAGATtggtgatgtcactcgctctgagaccttgatgtagttgttccccttgctctgcaagggctttTGTAGAGCGATGGGTgatgatgcttcgtgggtgtcagttgttgatgtgtgcagagggttgctggttcgagcacaggtaggggcgaggagagggacggaagctatactgtcaCAGAAGCACACGGCTTagacaacacagaagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057513 True 315 lncRNA 0.52 1 81453411 81453725

Neighbor

gene id symbol gene type direction distance location
LOC110510686 LOC106597603 coding upstream 67045 81373583 ~ 81386366 (+)
LOC118936811 LOC106593215 coding upstream 206060 81239097 ~ 81247351 (+)
LOC110530284 LOC106592313 coding upstream 233014 81217975 ~ 81220397 (+)
LOC110514786 LOC106592710 coding upstream 439160 80942545 ~ 81014251 (+)
LOC118936804 NA coding upstream 517350 80935213 ~ 80936319 (+)
LOC110518956 LOC106595358 coding downstream 32871 81486596 ~ 81506482 (+)
LOC118936817 NA coding downstream 49484 81503209 ~ 81504564 (+)
LOC110513527 LOC106595035 coding downstream 72789 81526514 ~ 81534991 (+)
LOC118936818 LOC106576580 coding downstream 105019 81558744 ~ 81615329 (+)
LOC118936819 LOC106602658 coding downstream 163735 81617460 ~ 81672338 (+)
G928784 NA non-coding upstream 8379 81409186 ~ 81445032 (+)
G928750 NA non-coding upstream 13435 81406723 ~ 81439976 (+)
G928710 NA non-coding upstream 16412 81340848 ~ 81436999 (+)
G928704 LOC106592660 non-coding upstream 16809 81339733 ~ 81436602 (+)
G928865 NA non-coding upstream 20998 81430329 ~ 81432413 (+)
G928882 NA non-coding downstream 2827 81456552 ~ 81457073 (+)
G928883 NA non-coding downstream 4011 81457736 ~ 81457950 (+)
G928885 NA non-coding downstream 14005 81467730 ~ 81469858 (+)
G928886 NA non-coding downstream 14748 81468473 ~ 81469116 (+)
G928888 NA non-coding downstream 24227 81477952 ~ 81479343 (+)
G928765 NA other upstream 103080 81349536 ~ 81350331 (+)
G928757 NA other upstream 123062 81277039 ~ 81330349 (+)
G928705 LOC106594836 other upstream 139663 81067884 ~ 81313748 (+)
G928929 NA other downstream 199666 81653391 ~ 81654391 (+)

Expression


Co-expression Network