G928950



Basic Information


Item Value
gene id G928950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81733943 ~ 81734340 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1057612
ggctggatctgatttatgtctagagaaactacaactccctactacatcacacagttcaggctggatctgatttatctctagagaaactacaactccctagtTGCACAGTTCAGTCTgggtctgatttatctctagagaaactacaactccctactacatcacacagttcaggctggatctgatttatctctagagaaactacaactccctactacatcacacagttcaggctggatctgatttatctctagagaaactacaactccctactacatcacacagttcaggctggatctgatttatctctagagaaactacaactccctagttgcacagttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1057612 True 339 lncRNA 0.42 2 81733943 81734340

Neighbor


gene id symbol gene type direction distance location
LOC118936820 NA coding upstream 48504 81682434 ~ 81685439 (+)
LOC118936819 LOC106602658 coding upstream 61605 81617460 ~ 81672338 (+)
LOC118936818 LOC106576580 coding upstream 118614 81558744 ~ 81615329 (+)
LOC110513527 LOC106595035 coding upstream 198952 81526514 ~ 81534991 (+)
LOC118936817 NA coding upstream 229379 81503209 ~ 81504564 (+)
LOC110515659 NA coding downstream 15882 81750222 ~ 81754997 (+)
LOC118936822 NA coding downstream 194805 81929145 ~ 81942287 (+)
LOC118936939 NA coding downstream 229744 81964084 ~ 81965938 (+)
LOC118936823 pgm2 coding downstream 246454 81980794 ~ 81986434 (+)
LOC118936694 tbc1d1 coding downstream 263081 81997421 ~ 82120937 (+)
LOC110514629 melk non-coding upstream 2265 81721230 ~ 81745845 (+)
G928948 NA non-coding upstream 6270 81727468 ~ 81727673 (+)
G928947 NA non-coding upstream 31117 81702543 ~ 81702826 (+)
G928932 NA non-coding upstream 54304 81679392 ~ 81679639 (+)
G928913 NA non-coding upstream 55510 81677828 ~ 81678433 (+)
G928954 NA non-coding downstream 12699 81747039 ~ 81747672 (+)
G928957 NA non-coding downstream 22088 81756428 ~ 81768547 (+)
G928970 NA non-coding downstream 54074 81788414 ~ 81790395 (+)
G928972 NA non-coding downstream 69065 81803405 ~ 81804725 (+)
G928979 NA non-coding downstream 95744 81830084 ~ 81831955 (+)
G928929 NA other upstream 79552 81653391 ~ 81654391 (+)
G929033 NA other downstream 213770 81948110 ~ 81961513 (+)
LOC118936825 LOC106593007 other downstream 439125 82173331 ~ 82211022 (+)
G929113 NA other downstream 445446 82179786 ~ 82180426 (+)
LOC110510824 LOC106594418 other downstream 479540 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 other downstream 557610 82261288 ~ 82306725 (+)

Expression



Co-expression Network