G929001


Basic Information

Item Value
gene id G929001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81888633 ~ 81889023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057695
AAAaacaacattggcagggcaattcaagcaaagtTAAGTAGGTTCTGTAGTTTAcggcacaaacctcattgctacagaactgttttatGATTGGTTCGTGTGGGTAACATTTTATAAGTCAAGGTAATAAAATATCAGAGCGGTAGATCTCTGCTTGCATTGTGACCTTGACTCAGACTAGGGTGGTGACCACTGTTgtagacgaattgaggctgttctgaggtgtTCTTAATGTCTCCAACACTCAGTGTACTCCTATGatagctcctctcctcccccctccccttctctccctccatctcctctcttctctccctactcctccccctctctctctccctccatctcatctcttctctcctctcctctctcccttctccccctctctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057695 True 391 lncRNA 0.47 1 81888633 81889023

Neighbor

gene id symbol gene type direction distance location
LOC110515659 NA coding upstream 133636 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 142788 81721230 ~ 81745845 (+)
LOC118936820 NA coding upstream 203194 81682434 ~ 81685439 (+)
LOC118936819 LOC106602658 coding upstream 216295 81617460 ~ 81672338 (+)
LOC118936818 LOC106576580 coding upstream 273304 81558744 ~ 81615329 (+)
LOC118936822 NA coding downstream 40122 81929145 ~ 81942287 (+)
LOC118936939 NA coding downstream 75061 81964084 ~ 81965938 (+)
LOC118936823 pgm2 coding downstream 91771 81980794 ~ 81986434 (+)
LOC118936694 tbc1d1 coding downstream 108398 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 284308 82173331 ~ 82211022 (+)
G929000 NA non-coding upstream 909 81887470 ~ 81887724 (+)
G928999 NA non-coding upstream 4081 81884073 ~ 81884552 (+)
G928998 NA non-coding upstream 7743 81880663 ~ 81880890 (+)
G928994 NA non-coding upstream 26669 81861744 ~ 81861964 (+)
G928993 NA non-coding upstream 29687 81858706 ~ 81858946 (+)
G929002 NA non-coding downstream 1056 81890079 ~ 81890400 (+)
G929005 NA non-coding downstream 4035 81893058 ~ 81893282 (+)
G929006 NA non-coding downstream 5848 81894871 ~ 81895075 (+)
G929008 NA non-coding downstream 6435 81895458 ~ 81895688 (+)
G929010 NA non-coding downstream 7329 81896352 ~ 81896676 (+)
G928929 NA other upstream 234242 81653391 ~ 81654391 (+)
LOC110513527 LOC106595035 other upstream 358751 81526514 ~ 81534991 (+)
G929033 NA other downstream 59087 81948110 ~ 81961513 (+)
G929113 NA other downstream 290763 82179786 ~ 82180426 (+)
LOC110510824 LOC106594418 other downstream 324857 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 other downstream 402927 82261288 ~ 82306725 (+)

Expression


Co-expression Network