G929002


Basic Information

Item Value
gene id G929002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81890079 ~ 81890400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057696
ctaatatggtcatacattgggcaggaggttaggaagtgcagctcagtttccacctcattttgtgggcagtgagcacatagcctgtcttctcttgagagccatgtctgcctacggcggcctttctcaatagcaaggctatgctcactgagtctgtacatagtcaaagctttccttaagtttgggtcagtcacagtggtcaggtattctgccgctgtgtactctctgtttagggccaaatagcattctagtttgctctgtttttttgttaattctttccaatgtgtcaagtaattatctttttgttttctcatgatttggttgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057696 True 322 lncRNA 0.43 1 81890079 81890400

Neighbor

gene id symbol gene type direction distance location
LOC110515659 NA coding upstream 135082 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 144234 81721230 ~ 81745845 (+)
LOC118936820 NA coding upstream 204640 81682434 ~ 81685439 (+)
LOC118936819 LOC106602658 coding upstream 217741 81617460 ~ 81672338 (+)
LOC118936818 LOC106576580 coding upstream 274750 81558744 ~ 81615329 (+)
LOC118936822 NA coding downstream 38745 81929145 ~ 81942287 (+)
LOC118936939 NA coding downstream 73684 81964084 ~ 81965938 (+)
LOC118936823 pgm2 coding downstream 90394 81980794 ~ 81986434 (+)
LOC118936694 tbc1d1 coding downstream 107021 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 282931 82173331 ~ 82211022 (+)
G929001 NA non-coding upstream 1056 81888633 ~ 81889023 (+)
G929000 NA non-coding upstream 2355 81887470 ~ 81887724 (+)
G928999 NA non-coding upstream 5527 81884073 ~ 81884552 (+)
G928998 NA non-coding upstream 9189 81880663 ~ 81880890 (+)
G928994 NA non-coding upstream 28115 81861744 ~ 81861964 (+)
G929005 NA non-coding downstream 2658 81893058 ~ 81893282 (+)
G929006 NA non-coding downstream 4471 81894871 ~ 81895075 (+)
G929008 NA non-coding downstream 5058 81895458 ~ 81895688 (+)
G929010 NA non-coding downstream 5952 81896352 ~ 81896676 (+)
G929020 NA non-coding downstream 20226 81910626 ~ 81911366 (+)
G928929 NA other upstream 235688 81653391 ~ 81654391 (+)
LOC110513527 LOC106595035 other upstream 360197 81526514 ~ 81534991 (+)
G929033 NA other downstream 57710 81948110 ~ 81961513 (+)
G929113 NA other downstream 289386 82179786 ~ 82180426 (+)
LOC110510824 LOC106594418 other downstream 323480 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 other downstream 401550 82261288 ~ 82306725 (+)

Expression


Co-expression Network