G929040


Basic Information

Item Value
gene id G929040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81958400 ~ 81959272 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057742
AacattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagtCCCGTCattctagttccaacattctagtcccgtcattctagttccaacattctagttccgtcattctagttccgtcattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagtcccatcat
>TU1057743
AacattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagtCCCGTCATTCTAGTCCCGTCATTCTAGTCCCGtcattctagttccaacattctagttccgtcattctagttccgtcattctagttccaacattctagttccaacattctagtcccgtcattctagttccaacattctagttccgtcattctagttccgtcattctagttccaacattctagttccgtcattctagttccaacattctagttccgtcattctagttccaacattctagttccaacattctagtcccatcat

Function

NR:

description
PREDICTED: leucine-rich repeat extensin-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057742 False 299 lncRNA 0.39 3 81958400 81959272
TU1057743 True 369 lncRNA 0.40 2 81958400 81959272

Neighbor

gene id symbol gene type direction distance location
LOC118936822 NA coding upstream 16113 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 203403 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 212555 81721230 ~ 81745845 (+)
LOC118936820 NA coding upstream 272961 81682434 ~ 81685439 (+)
LOC118936819 LOC106602658 coding upstream 286062 81617460 ~ 81672338 (+)
LOC118936939 NA coding downstream 4812 81964084 ~ 81965938 (+)
LOC118936823 pgm2 coding downstream 21522 81980794 ~ 81986434 (+)
LOC118936694 tbc1d1 coding downstream 38149 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 214059 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 253176 82212448 ~ 82232976 (+)
G929031 NA non-coding upstream 25081 81933118 ~ 81933319 (+)
G929026 NA non-coding upstream 31492 81924096 ~ 81926908 (+)
G929025 NA non-coding upstream 34410 81923616 ~ 81923990 (+)
G929023 NA non-coding upstream 41934 81916177 ~ 81916466 (+)
G929022 NA non-coding upstream 43858 81913318 ~ 81914542 (+)
G929042 NA non-coding downstream 2458 81961730 ~ 81962893 (+)
G929046 NA non-coding downstream 9898 81969170 ~ 81969403 (+)
G929049 NA non-coding downstream 11000 81970272 ~ 81970552 (+)
G929053 NA non-coding downstream 31595 81990867 ~ 81991508 (+)
G928929 NA other upstream 304009 81653391 ~ 81654391 (+)
LOC118936818 LOC106576580 other upstream 362648 81558744 ~ 81615329 (+)
LOC110513527 LOC106595035 other upstream 428518 81526514 ~ 81534991 (+)
G929113 NA other downstream 220514 82179786 ~ 82180426 (+)
LOC118936827 LOC106591767 other downstream 332678 82261288 ~ 82306725 (+)
G929159 NA other downstream 349531 82308803 ~ 82309572 (+)

Expression


Co-expression Network