G929053


Basic Information

Item Value
gene id G929053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81990867 ~ 81991508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057761
GTCCctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccctagacacatggggagtgttggtcagagaccaggtcatctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccttagacacctggggagtgttggtcagagaccaggtcatctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccctagacacctggggagtgttggtcagagaccaggtcatctactcccctagacaatcatctctcattcctctctaaATGTGGGCACTTGTTCACTTCCTTGTCCTCTTTATGGCAGAATGTTAGAATGAGGAGACAACAAGACACGATGacacttttttattttaaatgcaCCGACTTGGTGGAACGCCCCCCCATATAGATGAATATATTATGTCAGAGGACGTGTTGTTTCGGATGAGCCTACGCTACCCTATAACCACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057761 True 642 lncRNA 0.52 1 81990867 81991508

Neighbor

gene id symbol gene type direction distance location
LOC118936823 pgm2 coding upstream 4433 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 26042 81964084 ~ 81965938 (+)
LOC118936822 NA coding upstream 48580 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 235870 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 245022 81721230 ~ 81745845 (+)
LOC118936694 tbc1d1 coding downstream 5913 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 181823 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 220940 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 coding downstream 269780 82261288 ~ 82306725 (+)
LOC118936828 wdr19 coding downstream 325213 82316721 ~ 82401240 (+)
G929049 NA non-coding upstream 20315 81970272 ~ 81970552 (+)
G929046 NA non-coding upstream 21464 81969170 ~ 81969403 (+)
G929042 NA non-coding upstream 27974 81961730 ~ 81962893 (+)
G929040 NA non-coding upstream 31595 81958400 ~ 81959272 (+)
G929062 NA non-coding downstream 2319 81993827 ~ 81994631 (+)
G929063 NA non-coding downstream 5095 81996603 ~ 81996820 (+)
G929064 NA non-coding downstream 8866 82000374 ~ 82000623 (+)
G929068 NA non-coding downstream 15756 82007264 ~ 82007759 (+)
G929072 NA non-coding downstream 21575 82013083 ~ 82092932 (+)
G929033 NA other upstream 29354 81948110 ~ 81961513 (+)
LOC118936819 LOC106602658 other upstream 334359 81617460 ~ 81672338 (+)
G928929 NA other upstream 336476 81653391 ~ 81654391 (+)
LOC118936818 LOC106576580 other upstream 395115 81558744 ~ 81615329 (+)
G929113 NA other downstream 188278 82179786 ~ 82180426 (+)
G929159 NA other downstream 317295 82308803 ~ 82309572 (+)

Expression


Co-expression Network