G929086


Basic Information

Item Value
gene id G929086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 82043670 ~ 82043946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1057814
cctcATCCACATGACATCATTtatgtcactctctctttctgtctcttttccgtctctctctctctctggctttcgcCCAAACAGAAATGCTGCCTCAACCATGAGATCACACACTCctcaccacagccctgtgtttaacacacacacacgcacgcacgcacgcacgcacgcacacacacacactaaccGTATACACCAATGATGATCAATCACCGCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1057814 True 221 lncRNA 0.50 2 82043670 82043946

Neighbor

gene id symbol gene type direction distance location
LOC118936823 pgm2 coding upstream 57236 81980794 ~ 81986434 (+)
LOC118936939 NA coding upstream 78845 81964084 ~ 81965938 (+)
LOC118936822 NA coding upstream 101383 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 288673 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 297825 81721230 ~ 81745845 (+)
LOC118936825 LOC106593007 coding downstream 129385 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 168502 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 coding downstream 217342 82261288 ~ 82306725 (+)
LOC118936828 wdr19 coding downstream 272775 82316721 ~ 82401240 (+)
LOC110512972 lias coding downstream 683469 82727415 ~ 82738670 (+)
G929084 NA non-coding upstream 2213 82040588 ~ 82041457 (+)
G929073 NA non-coding upstream 29263 82013403 ~ 82014407 (+)
G929068 NA non-coding upstream 35911 82007264 ~ 82007759 (+)
G929064 NA non-coding upstream 43047 82000374 ~ 82000623 (+)
G929063 NA non-coding upstream 46850 81996603 ~ 81996820 (+)
G929087 NA non-coding downstream 6580 82050526 ~ 82051275 (+)
LOC118936694 tbc1d1 non-coding downstream 15665 81997421 ~ 82120937 (+)
G929095 NA non-coding downstream 52380 82096326 ~ 82098832 (+)
G929096 NA non-coding downstream 57754 82101700 ~ 82103252 (+)
G929099 NA non-coding downstream 74187 82118133 ~ 82118947 (+)
G929033 NA other upstream 82157 81948110 ~ 81961513 (+)
LOC118936819 LOC106602658 other upstream 387162 81617460 ~ 81672338 (+)
G928929 NA other upstream 389279 81653391 ~ 81654391 (+)
LOC118936818 LOC106576580 other upstream 447918 81558744 ~ 81615329 (+)
G929113 NA other downstream 135840 82179786 ~ 82180426 (+)
G929159 NA other downstream 264857 82308803 ~ 82309572 (+)

Expression


Co-expression Network